RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 ISPDA4D126 451 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 SLC22A20A6NK97 555 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 VGLL3A8MV65 326 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 LINC01619G3V211 115 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 PRAMEF26H0Y7S4 382 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 H0YIV9 168 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 MYL12BO14950 172 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 CASC3O15234 703 aaKnown RBP2.1□□□□□ -2.07
LRCH3-211ENST00000466054 SLC19A2O60779 497 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 CATP04040 527 aaKnown RBP2.1□□□□□ -2.07
LRCH3-211ENST00000466054 MAS1P04201 325 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 THRAP10827 490 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 GALR1P47211 349 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 CMC4P56277 68 aaPredicted RBP2.1□□□□□ -2.07
LRCH3-211ENST00000466054 CLDN6P56747 220 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 RPS11P62280 158 aaKnown RBP eCLIP2.1□□□□□ -2.07
LRCH3-211ENST00000466054 RAB11AP62491 216 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 RBX1P62877 108 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 RAB11BQ15907 218 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 TPRG1LQ5T0D9 272 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 NDUFAF7Q7L592 441 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 WDR31Q8NA23 367 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 SLC26A10Q8NG04 563 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 OR4M2Q8NGB6 313 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 OR52N1Q8NH53 320 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 SFXN5Q8TD22 340 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 SNF8Q96H20 258 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 LHX5Q9H2C1 402 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 DYRK4Q9NR20 520 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 HEBP1Q9NRV9 189 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 TAS2R5Q9NYW4 299 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 CES1P1Q9UKY3 287 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 JCADQ9P266 1359 aa2.1□□□□□ -2.07
LRCH3-211ENST00000466054 IGKV3D-11A0A0A0MRZ8 115 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 A0A0B4J2E0 115 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 CCL15-CCL14A0A0B4J2E2 113 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 OR6C70A6NIJ9 312 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 H3BN98 237 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 SIVA1O15304 175 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 IGLV7-43P04211 117 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 MPIP34949 423 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 PRSS3P35030 304 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 PPP1CAP62136 330 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 ELF3P78545 371 aaPredicted RBP2.09□□□□□ -2.07
LRCH3-211ENST00000466054 RPL18AQ02543 176 aaKnown RBP2.09□□□□□ -2.07
LRCH3-211ENST00000466054 SPAG1Q07617 926 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 INCA1Q0VD86 236 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 CCL15Q16663 113 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 ZFAND6Q6FIF0 208 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 TMCO2Q7Z6W1 182 aaPredicted RBP2.09□□□□□ -2.07
LRCH3-211ENST00000466054 SLC30A8Q8IWU4 369 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 DAW1Q8N136 415 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 ORMDL3Q8N138 153 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 KIF2BQ8N4N8 673 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 RNF10Q8N5U6 811 aaKnown RBP2.09□□□□□ -2.07
LRCH3-211ENST00000466054 ZNF680Q8NEM1 530 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 OR10Z1Q8NGY1 313 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 ISOC2Q96AB3 205 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 MRPL48Q96GC5 212 aaKnown RBP2.09□□□□□ -2.07
LRCH3-211ENST00000466054 LINC00574Q9H8X3 128 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 FANCEQ9HB96 536 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 DDX19BQ9UMR2 479 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 OR51B2Q9Y5P1 312 aa2.09□□□□□ -2.07
LRCH3-211ENST00000466054 KIAA1671Q9BY89 1806 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 A0A1B0GTQ1 180 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 GOLGA6L4A6NEF3 574 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 HACD1B0YJ81 288 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 LCA5LO95447 670 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 MMP7P09237 267 aaPredicted RBP2.08□□□□□ -2.08
LRCH3-211ENST00000466054 STAG3L3P0CL85 134 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 RALBP11234 206 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 CLDN8P56748 225 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 PIP5KL1Q5T9C9 394 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 ULK3Q6PHR2 472 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 LINC00336Q6ZUF6 198 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 NT5DC3Q86UY8 548 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 RXFP2Q8WXD0 754 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 S100PBPQ96BU1 408 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 UBE2E2Q96LR5 201 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 ALS2CR12Q96Q35 445 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM175Q9BSA9 504 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 DHX35Q9H5Z1 703 aaKnown RBP2.08□□□□□ -2.08
LRCH3-211ENST00000466054 C8orf33Q9H7E9 229 aaPredicted RBP2.08□□□□□ -2.08
LRCH3-211ENST00000466054 ADA2Q9NZK5 511 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 PEF1Q9UBV8 284 aaKnown RBP2.08□□□□□ -2.08
LRCH3-211ENST00000466054 HMGXB4Q9UGU5 601 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 C2orf16Q68DN1 1984 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 WDR19Q8NEZ3 1342 aa2.08□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF99A8MXY4 864 aaPredicted RBP2.07□□□□□ -2.08
LRCH3-211ENST00000466054 AKR7A2O43488 359 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 CCDC22O60826 627 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 SCELO95171 688 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 TTC4O95801 387 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 CD28P10747 220 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 CD34P28906 385 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 TGFBR1P36897 503 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 ATP6V0D1P61421 351 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 TRDNQ13061 729 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms