RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 OPTNQ96CV9 577 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 OTUB2Q96DC9 234 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 CMTM5Q96DZ9 223 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 RBBP8Q99708 897 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 PORCNQ9H237 461 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM38AQ9H6F2 299 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 ACP6Q9NPH0 428 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 MAT2BQ9NZL9 334 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 ING4Q9UNL4 249 aa3.27□□□□□ -1.89
PTCD3-205ENST00000464541 POLR3HQ9Y535 204 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-205ENST00000464541 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CEMIPQ8WUJ3 1361 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 TRAV39A0A0B4J263 110 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 PLPP3O14495 311 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 SLC9A3R1O14745 358 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-205ENST00000464541 ALOX12BO75342 701 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 RCBTB2O95199 551 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 APOEP02649 317 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 TACSTD2P09758 323 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CT45A6P0DMU7 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CT45A5P0DMU8 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CT45A7P0DMV0 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 PSKH1P11801 424 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CYB561P49447 251 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 PRLHRP49683 370 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 RPL10AP62906 217 aaKnown RBP3.26□□□□□ -1.89
PTCD3-205ENST00000464541 ACTG2P63267 376 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 SP4Q02446 784 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 C2orf80Q0P641 193 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 TAL2Q16559 108 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CT45A1Q5HYN5 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 UBE2UQ5VVX9 321 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF615Q8N8J6 731 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 PRELID2Q8N945 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 C19orf18Q8NEA5 215 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 CT45A3Q8NHU0 189 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 DOK4Q8TEW6 326 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 RNF133Q8WVZ7 376 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 PPWD1Q96BP3 646 aaKnown RBP3.26□□□□□ -1.89
PTCD3-205ENST00000464541 LINC00477Q96M19 166 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 GPR21Q99679 349 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 RSG1Q9BU20 258 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 BEX2Q9BXY8 128 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 NEUROG2Q9H2A3 272 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 WDR55Q9H6Y2 383 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-205ENST00000464541 TRIM45Q9H8W5 580 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-205ENST00000464541 TMBIM4Q9HC24 238 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 RHBDL2Q9NX52 303 aa3.26□□□□□ -1.89
PTCD3-205ENST00000464541 ANKRD20A5PA0PJZ0 165 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TVP23AA6NH52 213 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 LRRN3E7EW58 273 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 M0R036 132 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 GPR171O14626 319 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 SGCEO43556 437 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 FKBP6O75344 327 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF189O75820 626 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TRAPPC6AO75865 159 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 NSA2O95478 260 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CATP04040 527 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF286BP0CG31 522 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 MUC1P15941 1255 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CEACAM3P40198 252 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 PPP1R2P41236 205 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 RPL14P50914 215 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 NCBP2P52298 156 aaKnown RBP eCLIP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 AP3S2P59780 193 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 ST3GAL4Q11206 333 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TPBGQ13641 420 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 MAD2L1BPQ15013 274 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TMED2Q15363 201 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 BSXQ3C1V8 233 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CLVS2Q5SYC1 327 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TPTE2P1Q5T6R2 138 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CPTPQ5TA50 214 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 Q5W150 140 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 APOBEC3HQ6NTF7 200 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 PPP1R2P3Q6NXS1 205 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 FAM173BQ6P4H8 233 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 LINC00173Q6ZV60 143 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM179Q6ZVK1 233 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM150AQ86TG1 271 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 MRPL52Q86TS9 123 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 STPG2Q8N412 459 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 LFNGQ8NES3 379 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 ERMNQ8TAM6 284 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 DNAJB3Q8WWF6 145 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 EEF1AKMT3Q96AZ1 226 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 RCN3Q96D15 328 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 OR5B12Q96R08 314 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 TSNAXQ99598 290 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 FOXC2Q99958 501 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CHAC1Q9BUX1 264 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 CWH43Q9H720 699 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 UBE2ZQ9H832 354 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 PLEKHA1Q9HB21 404 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 SPANXB1Q9NS25 103 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 C3orf18Q9UK00 162 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 SAMHD1Q9Y3Z3 626 aaKnown RBP3.25□□□□□ -1.89
PTCD3-205ENST00000464541 FHOD3Q2V2M9 1422 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms