RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 ISG15P05161 165 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 HTR1AP08908 422 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 THBS2P35442 1172 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 BTG1P62324 171 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM42Q69YG0 159 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF826PQ6ZT77 177 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZDHHC23Q8IYP9 409 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 RDH10Q8IZV5 341 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 OR1M1Q8NGA1 313 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 OR11L1Q8NGX0 322 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 MICU1Q9BPX6 476 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM165Q9HC07 324 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 RNF7Q9UBF6 113 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PSORS1C1Q9UIG5 152 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ENPP5Q9UJA9 477 aa12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■□□□□ 9.6
RAB11FIP3-208ENST00000464263 OR4C45A6NMZ5 311 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 E9PI62 339 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 SYT7O43581 403 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 XPNPEP2O43895 674 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF205O95201 554 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 LHBP01229 141 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 IGHV2-5P01817 119 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PIPP12273 146 aaPredicted RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 IRF2P14316 349 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CDH15P55291 814 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ST3GAL4Q11206 333 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF154Q13106 437 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ALKBH1Q13686 389 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CEACAM21Q3KPI0 293 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CEP78Q5JTW2 689 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 C1orf87Q8N0U7 546 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CCDC54Q8NEL0 328 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 OR5A2Q8NGI9 324 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 RNF170Q96K19 258 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 RTL8AQ9BWD3 113 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 FKBP14Q9NWM8 211 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 C1orf123Q9NWV4 160 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CNOT2Q9NZN8 540 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CLEC2DQ9UHP7 191 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 RRP15Q9Y3B9 282 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 DOCK11Q5JSL3 2073 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ARHGAP32A7KAX9 2087 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ANK3Q12955 4377 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PPIAL4EA0A075B759 164 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 A0A1B0GVI7 797 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ISPDA4D126 451 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 A6NIN4 97 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PPIAL4DF5H284 164 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 H3BSH0 61 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 LMX1BO60663 402 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 NRASP01111 189 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TGFAP01135 160 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 UBCP0CG48 685 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PPIAL4FP0DN26 164 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF16P17020 682 aaPredicted RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CFHR2P36980 270 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 MRPL28Q13084 256 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CLVS2Q5SYC1 327 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 C6orf141Q5SZD1 244 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TMEM244Q5VVB8 128 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 IZUMO2Q6UXV1 221 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 GCSAMQ8N6F7 178 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 HIST1H2AAQ96QV6 131 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 GAL3ST1Q99999 423 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ANKRD60Q9BZ19 345 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 PPIAL4AQ9Y536 164 aa12.92□□□□□ -0.34
RAB11FIP3-208ENST00000464263 LOC107986453A0A1B0GWG9 222 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 A6NLC8 198 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 A8MV72 311 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 B4DSR2 109 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CDIPTO14735 213 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 ZNF12P17014 697 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 MYF6P23409 242 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 TGM4P49221 684 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 GPM6AP51674 278 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 GBX2P52951 348 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 CSNK2BP67870 215 aa12.91□□□□□ -0.34
RAB11FIP3-208ENST00000464263 OR2G6Q5TZ20 316 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms