RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ANXA8P13928 327 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 TGM4P49221 684 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 RAG2P55895 527 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 PSMA6P60900 246 aaKnown RBP11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 GFOD2Q3B7J2 385 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 METAP1DQ6UB28 335 aaPredicted RBP11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 LDLRAD3Q86YD5 345 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 CPOQ8IVL8 374 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 THEM6Q8WUY1 208 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 LHX4Q969G2 390 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 TEX12Q9BXU0 123 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 HAO2Q9NYQ3 351 aa11.85□□□□□ -0.51
SNRNP40-203ENST00000463988 WIPF1O43516 503 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 NDUFB3O43676 98 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 SELENOFO60613 162 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 E2F6O75461 281 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 KNG1P01042 644 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 ALOX5APP20292 161 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 SLC2A5P22732 501 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 OMGP23515 440 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 ACKR3P25106 362 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 PRDX4Q13162 271 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 STUMQ69YW2 141 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 DEGS2Q6QHC5 323 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 NPRL2Q8WTW4 380 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 DNAJC9Q8WXX5 260 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 DYRK2Q92630 601 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 RAB3IPQ96QF0 476 aaPredicted RBP11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 SLC25A19Q9HC21 320 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 C1RLQ9NZP8 487 aa11.84□□□□□ -0.51
SNRNP40-203ENST00000463988 A0A0U1RQV5 110 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 A0A1B0GW55 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L2P0CJ85 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L3P0CJ86 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L4P0CJ87 422 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L5P0CJ88 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L6P0CJ89 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L7P0CJ90 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 AMY2BP19961 511 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 OCLNQ16625 522 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4L9Q6RFH8 374 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 ZDHHC23Q8IYP9 409 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 SCCPDHQ8NBX0 429 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 OR8B12Q8NGG6 310 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 WFDC12Q8WWY7 111 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 SEH1LQ96EE3 360 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 MED30Q96HR3 178 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 RNF170Q96K19 258 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 LYZL4Q96KX0 146 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 PKP2Q99959 881 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DCTN5Q9BTE1 182 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 TNFRSF19Q9NS68 423 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DNAJB9Q9UBS3 223 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 KLHDC2Q9Y2U9 406 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 CAB39Q9Y376 341 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 LRP12Q9Y561 859 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
SNRNP40-203ENST00000463988 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 TCRBV3S1A0A5B6 114 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 NKX6-3A6NJ46 265 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 ATP6V1B1P15313 513 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 PRKACGP22612 351 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 DCTDP32321 178 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 IER3P46695 156 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 MAP2K3P46734 347 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 RPS7P62081 194 aaKnown RBP11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 RELBQ01201 579 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 DNAL1Q4LDG9 190 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 C17orf107Q6ZR85 190 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 KRT77Q7Z794 578 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms