RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 H2AFY2Q9P0M6 372 aaPredicted RBP6.04□□□□□ -1.44
PTPRF-210ENST00000463041 CTSZQ9UBR2 303 aa6.04□□□□□ -1.44
PTPRF-210ENST00000463041 MGAM2Q2M2H8 2515 aa6.04□□□□□ -1.44
PTPRF-210ENST00000463041 IGHV3OR16-10A0A075B7F0 116 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 TRAV40A0A0B4J280 105 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 CENPVL3A0A0U1RRI6 287 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 TMEM269A0A1B0GVZ9 245 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF850A8MQ14 1090 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 SRRM5B3KS81 715 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 G3V2T6 193 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 MMP9P14780 707 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 EGR1P18146 543 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ACKR3P25106 362 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 TGM4P49221 684 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 HCCSP53701 268 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 PSMA6P60900 246 aaKnown RBP6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ARF6P62330 175 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 IL13RA1P78552 427 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 EFNB1P98172 346 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 HOXA4Q00056 320 aaPredicted RBP6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ROM1Q03395 351 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 POU4F2Q12837 409 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 PRDX4Q13162 271 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 DEFB112Q30KQ8 113 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 GFOD2Q3B7J2 385 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 CEACAM21Q3KPI0 293 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ZBTB37Q5TC79 503 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 LCN1P1Q5VSP4 162 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 METTL11BQ5VVY1 283 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 SHISA2Q6UWI4 295 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 Q6YL49 198 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 MEPCEQ7L2J0 689 aaKnown RBP6.03□□□□□ -1.44
PTPRF-210ENST00000463041 WDR86Q86TI4 376 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 TMEM86BQ8N661 226 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 LY6G5BQ8NDX9 201 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 BBS1Q8NFJ9 593 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 OR8B12Q8NGG6 310 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 OR5A2Q8NGI9 324 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF671Q8TAW3 534 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 MED30Q96HR3 178 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 LYZL4Q96KX0 146 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 DUX5Q96PT3 197 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 MNTQ99583 582 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 CCL13Q99616 98 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 PCGF1Q9BSM1 259 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 PPP1R3EQ9H7J1 279 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 HAO2Q9NYQ3 351 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
PTPRF-210ENST00000463041 LRP12Q9Y561 859 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 SOX21Q9Y651 276 aaPredicted RBP6.03□□□□□ -1.44
PTPRF-210ENST00000463041 KPTNQ9Y664 436 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 CMYA5Q8N3K9 4069 aa6.03□□□□□ -1.44
PTPRF-210ENST00000463041 IGHV3OR15-7A0A075B7D8 119 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 IGHV1-69DA0A0B4J2H0 117 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ZNF816-ZNF321PA0A0X1KG74 233 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 A0A1B0GUS0 222 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 CCDC182A6NF36 153 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SLC22A31A6NKX4 558 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 NDUFB3O43676 98 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 MTRF1O75570 445 aaKnown RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 IGHV1-69P01742 117 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 CRYBA1P05813 215 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SFTPBP07988 381 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 FASP25445 335 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 RIDAP52758 137 aaKnown RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 GNG3P63215 75 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 CSNK2BP67870 215 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 RIPPLY1Q0D2K3 151 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ATP6AP1Q15904 470 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 CDONQ4KMG0 1287 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 LRRC10Q5BKY1 277 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 WDR38Q5JTN6 314 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 AADACL4Q5VUY2 407 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 KDM4DQ6B0I6 523 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 BRD3OSQ6XYD6 125 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 C1orf122Q6ZSJ8 110 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 KCTD8Q6ZWB6 473 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 THAP5Q7Z6K1 395 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ZDHHC13Q8IUH4 622 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ZDHHC23Q8IYP9 409 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SCCPDHQ8NBX0 429 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 FAM81AQ8TBF8 368 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 TBC1D15Q8TC07 691 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 NPRL2Q8WTW4 380 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ST8SIA4Q92187 359 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 RPL3LQ92901 407 aaKnown RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 DUS3LQ96G46 650 aaKnown RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 RAB3IPQ96QF0 476 aaPredicted RBP6.02□□□□□ -1.45
PTPRF-210ENST00000463041 OR8B4Q96RC9 309 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 TBX15Q96SF7 602 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 PKP2Q99959 881 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 PBOV1Q9GZY1 135 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SLITRK2Q9H156 845 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 SMURF1Q9HCE7 757 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 KRT84Q9NSB2 600 aa6.02□□□□□ -1.45
PTPRF-210ENST00000463041 ACOXLQ9NUZ1 547 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms