RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CSF3P09919 207 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 PDLIM4P50479 330 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CDH15P55291 814 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 SLC3A1Q07837 685 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CEP78Q5JTW2 689 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CLVS2Q5SYC1 327 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 PRAMEF6Q5VXH4 476 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 TMEM42Q69YG0 159 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CLEC2AQ6UVW9 174 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 TGIF2LYQ8IUE0 185 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 ZDHHC23Q8IYP9 409 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CELF2-AS1Q8N7Q2 184 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 HPSE2Q8WWQ2 592 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 OR5P3Q8WZ94 311 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 RGP1Q92546 391 aaPredicted RBP9.98□□□□□ -0.81
CPNE1-221ENST00000462352 FAM168AQ92567 244 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 GHSRQ92847 366 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 C10orf35Q96D05 121 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 PGLYRP3Q96LB9 341 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 Q96MF0 132 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 ABCB9Q9NP78 766 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 DLL4Q9NR61 685 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 TREM2Q9NZC2 230 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 PPP1R3CQ9UQK1 317 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 ZNF281Q9Y2X9 895 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 CACNG2Q9Y698 323 aa9.98□□□□□ -0.81
CPNE1-221ENST00000462352 ANKRD61A6NGH8 418 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 TRIM64A6NGJ6 449 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 PLPP2O43688 288 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 NRASP01111 189 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CD1AP06126 327 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CELP19835 753 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 GATA4P43694 442 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CHN2P52757 468 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 DSCR9P59020 149 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 EMX1Q04741 257 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 MZT1Q08AG7 82 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 HFEQ30201 348 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 KCTD21Q4G0X4 260 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 DMRTC1Q5HYR2 192 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 PLCXD3Q63HM9 321 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 MOB3CQ70IA8 216 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 WDR86Q86TI4 376 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 SPARTQ8N0X7 666 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 SVOPQ8N4V2 548 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 OR13C3Q8NGS6 347 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 C10orf105Q8TEF2 133 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 TSEN15Q8WW01 171 aaKnown RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CCL17Q92583 94 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 FGGYQ96C11 551 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 ADAT3Q96EY9 351 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 HIST1H2AAQ96QV6 131 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 MICU1Q9BPX6 476 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 RTL8AQ9BWD3 113 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CHST5Q9GZS9 411 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 FGF23Q9GZV9 251 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CHODLQ9H9P2 273 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 GCM1Q9NP62 436 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 ACOT13Q9NPJ3 140 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 GPR173Q9NS66 373 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 ZNF275Q9NSD4 429 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 C14orf119Q9NWQ9 140 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 DHDHQ9UQ10 334 aa9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CHD3Q12873 2000 aaKnown RBP9.97□□□□□ -0.81
CPNE1-221ENST00000462352 CREBBPQ92793 2442 aa9.96□□□□□ -0.81
CPNE1-221ENST00000462352 IGHV4-30-2A0A087WSY4 118 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 NDUFS8O00217 210 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 TNFAIP8O95379 198 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 GRPP07492 148 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 HSMCR30P0CW71 290 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ZNF20P17024 532 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 THBS2P35442 1172 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 RBMXP38159 391 aaKnown RBP9.96□□□□□ -0.82
CPNE1-221ENST00000462352 RIN1Q13671 783 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 MPPED2Q15777 294 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 CEACAM21Q3KPI0 293 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 YIF1BQ5BJH7 314 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ZNF773Q6PK81 442 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 OR1M1Q8NGA1 313 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 OR13C5Q8NGS8 318 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ZNF420Q8TAQ5 688 aaPredicted RBP9.96□□□□□ -0.82
CPNE1-221ENST00000462352 PP6455Q8WZ26 134 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ERGIC1Q969X5 290 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 RNF170Q96K19 258 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ISYNA1Q9NPH2 558 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 TMEM106BQ9NUM4 274 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 UFSP2Q9NUQ7 469 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 DCAF16Q9NXF7 216 aa9.96□□□□□ -0.82
CPNE1-221ENST00000462352 ITPR3Q14573 2671 aa9.95□□□□□ -0.82
CPNE1-221ENST00000462352 TRBV5-5A0A0J9YX44 114 aa9.95□□□□□ -0.82
CPNE1-221ENST00000462352 TRIM64BA6NI03 449 aa9.95□□□□□ -0.82
CPNE1-221ENST00000462352 TMEM210A6NLX4 147 aa9.95□□□□□ -0.82
CPNE1-221ENST00000462352 VWC2LB2RUY7 222 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms