RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	GGT2	P36268	569 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	CAPG	P40121	348 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	CDKN2A	P42771	156 aa	Known RBP	10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	MAB21L1	Q13394	359 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	AQP6	Q13520	282 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	CRMP1	Q14194	572 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	METAP1D	Q6UB28	335 aa	Predicted RBP	10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	PTCHD4	Q6ZW05	846 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	BTN2A1	Q7KYR7	527 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	VMO1	Q7Z5L0	202 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	KLHDC1	Q8N7A1	406 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	CYB561A3	Q8NBI2	242 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	SLC37A3	Q8NCC5	494 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR1F12	Q8NHA8	337 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	WWC2-AS2	Q96NR7	200 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	SYT4	Q9H2B2	425 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	CNTD2	Q9H8S5	307 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	RPRD1B	Q9NQG5	326 aa	Known RBP	10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	ATPIF1	Q9UII2	106 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	SIGLEC9	Q9Y336	463 aa		10.81	□□□□□ -0.68
SNHG17-208	ENST00000456953	PRR23D1	E9PI22	279 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953		H0YAE9	185 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953		M0R129	80 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	PRKY	O43930	277 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	SLC16A7	O60669	478 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	MPIG6B	O95866	241 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	CRABP1	P29762	137 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	CD200	P41217	278 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	KIR2DS4	P43632	304 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	CENPA	P49450	140 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	GUCA2A	Q02747	115 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	EMX1	Q04741	257 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	FOXB2	Q5VYV0	432 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	PLBD1	Q6P4A8	553 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	DNM1P34	Q6PK57	102 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	C1orf122	Q6ZSJ8	110 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	TCEANC	Q8N8B7	351 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	SETD9	Q8NE22	299 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR4C13	Q8NGP0	309 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR2T4	Q8NH00	348 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR2T6	Q8NHC8	308 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	IL4I1	Q96RQ9	567 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	PITX2	Q99697	317 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	HCAR1	Q9BXC0	346 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	FN3K	Q9H479	309 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	SRA1	Q9HD15	236 aa	Known RBP	10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	UFSP2	Q9NUQ7	469 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	VSX1	Q9NZR4	365 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	RNF7	Q9UBF6	113 aa		10.8	□□□□□ -0.68
SNHG17-208	ENST00000456953	TRAV38-1	A0A0B4J264	116 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR6C68	A6NDL8	312 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	FAM183A	A6NL82	134 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	MPZL2	O60487	215 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	KHDRBS3	O75525	346 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	CLIC3	O95833	236 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	PAH	P00439	452 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	DBH	P09172	617 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	EEF1B2	P24534	225 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	ADARB1	P78563	741 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	IL5RA	Q01344	420 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	IL18R1	Q13478	541 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR8B8	Q15620	311 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	MPPED2	Q15777	294 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	CPO	Q8IVL8	374 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	PROKR2	Q8NFJ6	384 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR8J1	Q8NGP2	316 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR9Q1	Q8NGQ5	310 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	PPP1R35	Q8TAP8	253 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	TMEM163	Q8TC26	289 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	TRUB1	Q8WWH5	349 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	TFAP2C	Q92754	450 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	ITPKC	Q96DU7	683 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	ZNF184	Q99676	751 aa	Predicted RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	NUAK2	Q9H093	628 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953		Q9H521	79 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	FN3KRP	Q9HA64	309 aa		10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	EPPK1	P58107	5090 aa	Known RBP	10.79	□□□□□ -0.68
SNHG17-208	ENST00000456953	OOEP	A6NGQ2	149 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	DVL1	O14640	695 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	NPFF	O15130	113 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	HLA-DQA2	P01906	255 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	SLC25A1	P53007	311 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	RPS7	P62081	194 aa	Known RBP	10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	HOXA4	Q00056	320 aa	Predicted RBP	10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	NSUN5P1	Q3KNT7	163 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	KLHL12	Q53G59	568 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	PRAMEF6	Q5VXH4	476 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	CMTM4	Q8IZR5	234 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR6V1	Q8N148	313 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	BOLL	Q8N9W6	283 aa	Known RBP	10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR4F17	Q8NGA8	305 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	DMRTB1	Q96MA1	342 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	TSSK2	Q96PF2	358 aa		10.78	□□□□□ -0.68
SNHG17-208	ENST00000456953	OR4F4	Q96R69	305 aa		10.78	□□□□□ -0.68

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