RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 FBP2O00757 339 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 SDHDO14521 159 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 POLR3GO15318 223 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 SGCEO43556 437 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 TYROBPO43914 113 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DOK2O60496 412 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 SERPINB7O75635 380 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 PAHP00439 452 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 MBPP02686 304 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 GYPAP02724 150 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 MT-ND1P03886 318 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST1H2ABP04908 130 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L2P0CJ85 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L3P0CJ86 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L4P0CJ87 422 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L5P0CJ88 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L6P0CJ89 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L7P0CJ90 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 T-ENOLP0DO92 83 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 GPX2P18283 190 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 FUT1P19526 365 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 MSR1P21757 451 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 CASQ1P31415 396 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 CDKN2AP42771 156 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 GUCA1AP43080 201 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 HTR5AP47898 357 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 TGM4P49221 684 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 RPL14P50914 215 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 NME5P56597 212 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 NCALDP61601 193 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST1H3AP68431 136 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 ELF3P78545 371 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 CDK6Q00534 326 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 PRB3Q04118 309 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 CKAP4Q07065 602 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 CD47Q08722 323 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 KLRD1Q13241 179 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 GK2Q14410 553 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 LY6EQ16553 131 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 LRRC75BQ2VPJ9 315 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 KRTAP27-1Q3LI81 207 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 CCDC92Q53HC0 331 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 ENTPD8Q5MY95 495 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 LRIF1Q5T3J3 769 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 INTS11Q5TA45 600 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 ATPAF1Q5TC12 328 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST2H3PS2Q5TEC6 136 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 PRAMEF6Q5VXH4 476 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 NCR3LG1Q68D85 454 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 TTC33Q6PID6 262 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4L9Q6RFH8 374 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST2H3AQ71DI3 136 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 FAM57BQ71RH2 274 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST3H2AQ7L7L0 130 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 NANOGNBQ7Z5D8 188 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 RBM45Q8IUH3 476 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 MSRB3Q8IXL7 192 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 C11orf42Q8N5U0 333 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 LRRC75AQ8NAA5 344 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 BHLHE23Q8NDY6 225 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 GPR32P1Q8NGA4 272 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 OR4D11Q8NGI4 311 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 OR51G2Q8NGK0 314 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 OR5L1Q8NGL2 311 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 OR11L1Q8NGX0 322 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 MOSPD2Q8NHP6 518 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 NFKBIDQ8NI38 313 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 RORBQ92753 470 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 HIST1H2ACQ93077 130 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 APOBEC3DQ96AK3 386 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 ITCHQ96J02 903 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 MCHR1Q99705 422 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 RAD21L1Q9H4I0 556 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 METTL8Q9H825 291 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 SDR39U1Q9NRG7 319 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 UFSP2Q9NUQ7 469 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 ARL8BQ9NVJ2 186 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 SLC25A37Q9NYZ2 338 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 ZIM2Q9NZV7 527 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 DUX4Q9UBX2 424 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 PRPF19Q9UMS4 504 aaKnown RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 RAP2CQ9Y3L5 183 aa2.94□□□□□ -1.94
RBM39-220ENST00000455343 SIRT4Q9Y6E7 314 aaPredicted RBP2.94□□□□□ -1.94
RBM39-220ENST00000455343 DNAH10Q8IVF4 4471 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 TRBV5-3A0A0A0MS03 114 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 TRAPPC13A5PLN9 417 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 A6NDX4 124 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 CPSF4LA6NMK7 179 aaKnown RBP2.93□□□□□ -1.94
RBM39-220ENST00000455343 C5orf58C9J3I9 102 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 H0YHG0 523 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.93□□□□□ -1.94
RBM39-220ENST00000455343 KPNA4O00629 521 aaPredicted RBP2.93□□□□□ -1.94
RBM39-220ENST00000455343 RER1O15258 196 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 GMDSO60547 372 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 OR7A10O76100 309 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 ANP32DO95626 131 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 SERPINE1P05121 402 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 TMEM225BP0DP42 221 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 UMPSP11172 480 aa2.93□□□□□ -1.94
RBM39-220ENST00000455343 LYL1P12980 280 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms