RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CELA3BP08861 270 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 DMRTC1Q5HYR2 192 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 DNM1P46Q6ZS02 220 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 KRT74Q7RTS7 529 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 UBASH3BQ8TF42 649 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 FCAMRQ8WWV6 532 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 PIGTQ969N2 578 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 KCNN3Q9UGI6 736 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 TRAV18A0A075B6X5 111 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 NAT2P11245 290 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 KLRB1Q12918 225 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 RAB12Q6IQ22 244 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 ZNF474Q6S9Z5 364 aaPredicted RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 MYPOPQ86VE0 399 aaPredicted RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 OR52I2Q8NH67 350 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 KCNG3Q8TAE7 436 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 ITPKCQ96DU7 683 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 AUNIPQ9H7T9 357 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
USP39-207ENST00000450066 EIF3KQ9UBQ5 218 aaKnown RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 RBMX2Q9Y388 322 aaKnown RBP12.31□□□□□ -0.44
USP39-207ENST00000450066 OR5H1A6NKK0 313 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 ORC5O43913 435 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 OPRM1P35372 400 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 MTCP1P56278 107 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 RBPJQ06330 500 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 HLXQ14774 488 aaPredicted RBP12.3□□□□□ -0.44
USP39-207ENST00000450066 RNASE12Q5GAN4 147 aaKnown RBP12.3□□□□□ -0.44
USP39-207ENST00000450066 RFPL4BQ6ZWI9 263 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 TOMM5Q8N4H5 51 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 CSNK2A3Q8NEV1 391 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 OR56B2PQ8NGI1 322 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 GCDHQ92947 438 aaPredicted RBP12.3□□□□□ -0.44
USP39-207ENST00000450066 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 ZC3HAV1LQ96H79 300 aaKnown RBP12.3□□□□□ -0.44
USP39-207ENST00000450066 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 MSTNO14793 375 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 SCGNO76038 276 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 GDNFP39905 211 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 RBP2P50120 134 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 FAM169BQ8N8A8 192 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 TNFAIP8L1Q8WVP5 186 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 PIGCQ92535 297 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 WBP1Q96G27 269 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 POFUT1Q9H488 388 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 SLC7A11Q9UPY5 501 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 AMDHD2Q9Y303 409 aa12.3□□□□□ -0.44
USP39-207ENST00000450066 FAM230AA0A1W2PPH8 454 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 CST4P01036 141 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 PTHLHP12272 177 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 SRP9P49458 86 aaKnown RBP12.29□□□□□ -0.44
USP39-207ENST00000450066 FUT6P51993 359 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 TMEM104Q8NE00 496 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 OR5D18Q8NGL1 313 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 ENKURQ8TC29 256 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 BORCS8Q96FH0 119 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 NUDT16L1Q9BRJ7 211 aaKnown RBP12.29□□□□□ -0.44
USP39-207ENST00000450066 CST11Q9H112 138 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 PIGMQ9H3S5 423 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 MOV10Q9HCE1 1003 aaKnown RBP12.29□□□□□ -0.44
USP39-207ENST00000450066 ZNF629Q9UEG4 869 aaPredicted RBP12.29□□□□□ -0.44
USP39-207ENST00000450066 CACNG2Q9Y698 323 aa12.29□□□□□ -0.44
USP39-207ENST00000450066 A0A0G2JNJ9 132 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 FUOMA2VDF0 154 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 RAB27BO00194 218 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 CDC14BO60729 498 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 SMPD2O60906 423 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 AGFG2O95081 481 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
USP39-207ENST00000450066 IGLV1-44P01699 117 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 IL32P24001 234 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 KIR2DL3P43628 341 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ZP1P60852 638 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 DYRK1AQ13627 763 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
USP39-207ENST00000450066 GPR176Q14439 515 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 PLCXD3Q63HM9 321 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 MOB3CQ70IA8 216 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 C1QL2Q7Z5L3 287 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 CDH24Q86UP0 819 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 DUSP18Q8NEJ0 188 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 S100A13Q99584 98 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 GAL3ST1Q99999 423 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 PRORYQ9H606 182 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 Q9UFV3 132 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms