RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 NPIPA5E9PKD4 350 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 PRAMEF26H0Y7S4 382 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 TRGC2P03986 189 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 GP1BBP13224 206 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 ZNF708P17019 499 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 GABRR1P24046 479 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SRSF4Q08170 494 aaKnown RBP12.47□□□□□ -0.41
CHFR-205ENST00000450056 PHLDA2Q53GA4 152 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SLC26A10Q8NG04 563 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 PMM1Q92871 262 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 CTHRC1Q96CG8 243 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 NPIPA1Q9UND3 350 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 CHD9Q3L8U1 2897 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 H3BML4 177 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SMIM10L1P0DMW3 83 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SNCAP37840 140 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 PNLIPRP3Q17RR3 467 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 MEX3BQ6ZN04 569 aaKnown RBP12.47□□□□□ -0.41
CHFR-205ENST00000450056 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 LRRC75AQ8NAA5 344 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SMIM10Q96HG1 83 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SLC35B3Q9H1N7 401 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SOHLH2Q9NX45 425 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 PPP4R1LQ9P1A2 415 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 OBSL1O75147 1896 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 H0YL77 283 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 CYTIPO60759 359 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 IL11P20809 199 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 RPS23P62266 143 aaKnown RBP12.47□□□□□ -0.41
CHFR-205ENST00000450056 SUPT4H1P63272 117 aaKnown RBP12.47□□□□□ -0.41
CHFR-205ENST00000450056 NHLH2Q02577 135 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
CHFR-205ENST00000450056 SGPP2Q8IWX5 399 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 SLC17A4Q9Y2C5 497 aa12.47□□□□□ -0.41
CHFR-205ENST00000450056 UNC13CQ8NB66 2214 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 A0A087WZY1 265 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 FAM221AA4D161 298 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 NUDT21O43809 227 aaKnown RBP12.46□□□□□ -0.41
CHFR-205ENST00000450056 HEXBP07686 556 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 ABCA11PQ4W5N1 156 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
CHFR-205ENST00000450056 RSC1A1Q92681 617 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 GPX7Q96SL4 187 aaPredicted RBP12.46□□□□□ -0.41
CHFR-205ENST00000450056 ZNF2Q9BSG1 426 aaPredicted RBP12.46□□□□□ -0.41
CHFR-205ENST00000450056 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 CYP8B1Q9UNU6 501 aa12.46□□□□□ -0.41
CHFR-205ENST00000450056 PHF3Q92576 2039 aaKnown RBP12.46□□□□□ -0.41
CHFR-205ENST00000450056 TAAR5O14804 337 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 RAD51DO75771 328 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 SCAF4O95104 1147 aaKnown RBP12.46□□□□□ -0.42
CHFR-205ENST00000450056 GJA4P35212 333 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 ISXQ2M1V0 245 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 THOC3Q96J01 351 aaKnown RBP12.46□□□□□ -0.42
CHFR-205ENST00000450056 ATG101Q9BSB4 218 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 WASF3Q9UPY6 502 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 VDAC3Q9Y277 283 aa12.46□□□□□ -0.42
CHFR-205ENST00000450056 ZNF587BE7ETH6 402 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 ZNF217O75362 1048 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 FGF19O95750 216 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 F10P00742 488 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 OPRM1P35372 400 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
CHFR-205ENST00000450056 RBP2P50120 134 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 GGNBP1Q5YKI7 109 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 DPPA2Q7Z7J5 298 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 C1orf123Q9NWV4 160 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 DOCK8Q8NF50 2099 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 CEP290O15078 2479 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 ZNF850A8MQ14 1090 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
CHFR-205ENST00000450056 HNF4GQ14541 408 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 EMC4Q5J8M3 183 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 ZNF440Q8IYI8 595 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 ARRDC1Q8N5I2 433 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 MRPL43Q8N983 215 aaKnown RBP12.45□□□□□ -0.42
CHFR-205ENST00000450056 RTBDNQ9BSG5 229 aaPredicted RBP12.45□□□□□ -0.42
CHFR-205ENST00000450056 OPA3Q9H6K4 179 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 KIAA1549LQ6ZVL6 1849 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 DBX1A6NMT0 343 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 SOX15O60248 233 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 HOXA5P20719 270 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 SLC6A9P48067 706 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 SLC35A1P78382 337 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 ZNF117Q03924 483 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 RSPO4Q2I0M5 234 aaPredicted RBP12.45□□□□□ -0.42
CHFR-205ENST00000450056 PHF19Q5T6S3 580 aa12.45□□□□□ -0.42
CHFR-205ENST00000450056 SLC25A24Q6NUK1 477 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms