RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MEMO1Q9Y316 297 aa11.98□□□□□ -0.49
SYNGAP1-204ENST00000449372 TP53I11O14683 189 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 TAGLN2P37802 199 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 ERVFRD-1P60508 538 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 FAHD2BQ6P2I3 314 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 PRSS41Q7RTY9 318 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 FJX1Q86VR8 437 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 FAHD2AQ96GK7 314 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 SRA1Q9HD15 236 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 SH3BGRL2Q9UJC5 107 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 KIR2DS5A0A0G2JLQ3 304 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 A0A0G2JNG1 304 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 KIR2DS3K7RE56 304 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 CYR61O00622 381 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 TCF21O43680 179 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 CCKBRP32239 447 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 PPP1CAP62136 330 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 COL9A2Q14055 689 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 KIR2DS5Q14953 304 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 TMEM52Q8NDY8 209 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 HIF3AQ9Y2N7 669 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 A0A1W2PPC4 97 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 DFFBO76075 338 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 ACAA2P42765 397 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 MFSD8Q8NHS3 518 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 SNIP1Q8TAD8 396 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 FAM46BQ96A09 425 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 SNX22Q96L94 193 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 GNRHR2Q96P88 292 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 PRTFDC1Q9NRG1 225 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 CYP8B1Q9UNU6 501 aa11.97□□□□□ -0.49
SYNGAP1-204ENST00000449372 CDRT15L2A8MXV6 281 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 TAAR5O14804 337 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 SRFP11831 508 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 TACR3P29371 465 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 GRPRP30550 384 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 RBX1P62877 108 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 ADGRE4PQ86SQ3 457 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZDHHC22Q8N966 263 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR9A4Q8NGU2 314 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 METTL21AQ8WXB1 218 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 RASD2Q96D21 266 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 MRGPRX4Q96LA9 322 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 Q96M85 177 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 CACNA1IQ9P0X4 2223 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 CST4P01036 141 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 CSTBP04080 98 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 CXCR1P25024 350 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 PPM1FP49593 454 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 LINC00114Q6XXX2 140 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 CCDC74BQ96LY2 380 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 A0A0C4DFX4 3053 aa11.96□□□□□ -0.49
SYNGAP1-204ENST00000449372 TRAV8-7A0A075B6U6 113 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 H3BSH0 61 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 M0QZK8 103 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 GGCTO75223 188 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 DIRAS3O95661 229 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 CD37P11049 281 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 PVRP15151 417 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 CFPP27918 469 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 ERVFC1-1P60608 527 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 MGAT2Q10469 447 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 CDC20BQ86Y33 519 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 SUMF2Q8NBJ7 301 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 ADAD2Q8NCV1 583 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEM104Q8NE00 496 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR4S1Q8NGB4 309 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 HOXB13Q92826 284 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM122AQ96E09 287 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 PITPNC1Q9UKF7 332 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 HHLA2Q9UM44 414 aa11.96□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR4C45A6NMZ5 311 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 B4E171 279 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 NPY4RP50391 375 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 HERPUD1Q15011 391 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 C2orf76Q3KRA6 126 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 NCR3LG1Q68D85 454 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CA13Q8N1Q1 262 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 PBDC1Q9BVG4 233 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 GPR87Q9BY21 358 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CIDEAO60543 219 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CA11O75493 328 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF823P16415 610 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 HLA-DQA1Q5Y7H0 255 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF774Q6NX45 483 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 FDX2Q6P4F2 183 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 SLC35G3Q8N808 338 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 LIPHQ8WWY8 451 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms