RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 AP2S1P53680 142 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF788Q6ZQV5 615 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CBLL1Q75N03 491 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBE3DQ7Z6J8 389 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MS4A15Q8N5U1 240 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 C9orf106Q8NAJ2 232 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF519Q8TB69 540 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ALG8Q9BVK2 526 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SIRT7Q9NRC8 400 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ANKHD1Q8IWZ3 2542 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 LIPT2A6NK58 231 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 NTN1O95631 604 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SORDQ00796 357 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CAMK2BQ13554 666 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 RAB31Q13636 194 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 HSD17B12Q53GQ0 312 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 KIAA2026Q5HYC2 2103 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC25A40Q8TBP6 338 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRRC29Q8WV35 223 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM186Q96B77 213 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 IL19Q9UHD0 177 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 POMPQ9Y244 141 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CACNG2Q9Y698 323 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRSS37A4D1T9 235 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SNNO75324 88 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TPPPO94811 219 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CPN1P15169 458 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRKACGP22612 351 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 LOXL3P58215 753 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PMS2P11Q13670 270 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CD226Q15762 336 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF791Q3KP31 576 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ANKRD55Q3KP44 614 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MDP1Q86V88 176 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SERPINA12Q8IW75 414 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR13C9Q8NGT0 318 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 NMD3Q96D46 503 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 DGCR14Q96DF8 476 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLAMF6Q96DU3 332 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TXLNGYQ9BZA5 131 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC7A10Q9NS82 523 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 RABAC1Q9UI14 185 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CNOT11Q9UKZ1 510 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 URGCP-MRPS24S4R325 110 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PSMG1O95456 288 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MT-ND2P03891 347 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TUBG1P23258 451 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CXCR4P61073 352 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR6F1Q8NGZ6 308 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR6X1Q8NH79 312 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 C15orf40Q8WUR7 153 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZFAND2BQ8WV99 257 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PCNPQ8WW12 178 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CXXC4Q9H2H0 198 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZDHHC8Q9ULC8 765 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SIRPB1O00241 398 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 NDUFA2O43678 99 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 RAB3DO95716 219 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SERPINA2P20848 420 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CD40P25942 277 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TFPI2P48307 235 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SELENOPP49908 381 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SUB1P53999 127 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 LHFPL3Q86UP9 236 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF615Q8N8J6 731 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MBD3L1Q8WWY6 194 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 DDB2Q92466 427 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 FAM46BQ96A09 425 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 C4orf45Q96LM5 186 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SH2D2AQ9NP31 389 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ADAMTS20P59510 1910 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A0G2JNJ9 132 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZSCAN5BA6NJL1 495 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SCGB1D2O95969 90 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 IFNA21P01568 189 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 GYPAP02724 150 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 THY1P04216 161 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 FABP1P07148 127 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGFBP1P08833 259 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CELP19835 753 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 UGT2B10P36537 528 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 GNG3P63215 75 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF273Q14593 569 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 MEP1BQ16820 701 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 RNASE12Q5GAN4 147 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 STUMQ69YW2 141 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 DRAM2Q6UX65 266 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PHC2Q8IXK0 858 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF511Q8NB15 262 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 NRGNQ92686 78 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 CA10Q9NS85 328 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SIRT3Q9NTG7 399 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 THYN1Q9P016 225 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 Q9UFV3 132 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 KLK4Q9Y5K2 254 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 PSMB1P20618 241 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 CA6P23280 308 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms