RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 HSPB6O14558 160 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SPRY1O43609 319 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 SSX5O60225 188 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 F10P00742 488 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SFTA3P0C7M3 94 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ZNF735P0CB33 412 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 OR13C7P0DN81 318 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 GNRHRP30968 328 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 GNMTQ14749 295 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 C1orf100Q5SVJ3 147 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 FAM213BQ8TBF2 198 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 KCNJ16Q9NPI9 418 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 UBE2J1Q9Y385 318 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 TO15178 435 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 DBHP09172 617 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 DAOP14920 347 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 FSTP19883 344 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 RRADP55042 308 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 P4HA3Q7Z4N8 544 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ARRDC1Q8N5I2 433 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ZNF565Q8N9K5 539 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ZSCAN4Q8NAM6 433 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 ST7LQ8TDW4 575 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 HDHD3Q9BSH5 251 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 KIAA1549LQ6ZVL6 1849 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 IGHV1OR15-9A0A0B4J2B8 117 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 OR7C1O76099 320 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 IFI6P09912 130 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ZNF345Q14585 488 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ZNF813Q6ZN06 617 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 BHLHE23Q8NDY6 225 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 OR2AE1Q8NHA4 323 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 PIGCQ92535 297 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SPTSSAQ969W0 71 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SLC5A7Q9GZV3 580 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 A0A1W2PQD3 144 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 RAB19A4D1S5 217 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 MBTPS2O43462 519 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 RAD51DO75771 328 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 CD74P04233 296 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 NR2C1P13056 603 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 OR2B8PP59922 312 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 GPR85P60893 370 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ACY1Q03154 408 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 ASPHD2Q6ICH7 369 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 UQCC3Q6UW78 93 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 FBXW12Q6X9E4 464 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 NOXO1Q8NFA2 376 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 CHRDQ9H2X0 955 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 SPACA1Q9HBV2 294 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 PADI1Q9ULC6 663 aa10.51□□□□□ -0.73
MSH6-204ENST00000445503 MRPS17Q9Y2R5 130 aaKnown RBP10.51□□□□□ -0.73
MSH6-204ENST00000445503 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 TRIM77I1YAP6 450 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 ACTL6AO96019 429 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 CD8AP01732 235 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 OR5H8P0DN80 308 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 TBPP20226 339 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 PTGFRP43088 359 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 DCDP81605 110 aaKnown RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 DMWDQ09019 674 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 DRAM2Q6UX65 266 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 OR10C1Q96KK4 312 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 CRYBA1P05813 215 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 GLAP06280 429 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 KLK3P07288 261 aaPredicted RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 RAB13P51153 203 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 SNRPEP62304 92 aaKnown RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 PRSS54Q6PEW0 395 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 NANPQ8TBE9 248 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 EMG1Q92979 244 aaKnown RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 FAAP24Q9BTP7 215 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 BCAT2O15382 392 aaPredicted RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 PHF1O43189 567 aaPredicted RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 CLPSP04118 112 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 MECP2P51608 486 aaKnown RBP10.5□□□□□ -0.73
MSH6-204ENST00000445503 SECTM1Q8WVN6 248 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 ISOC2Q96AB3 205 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 REEP6Q96HR9 211 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 GNRHR2Q96P88 292 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 MMP26Q9NRE1 261 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 SMCO4Q9NRQ5 59 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 WBP1LQ9NX94 342 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
MSH6-204ENST00000445503 SPP1P10451 314 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 FPR2P25090 351 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 PIGPP57054 158 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms