RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PRSS57Q6UWY2 283 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 Q6ZR03 302 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 PRIMA1Q86XR5 153 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 CSNK2A3Q8NEV1 391 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 OR2Z1Q8NG97 314 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 OR10AD1Q8NGE0 317 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 OR14A2Q96R54 314 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 CACNG6Q9BXT2 260 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 GPR173Q9NS66 373 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 TMEM100Q9NV29 134 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ENPP5Q9UJA9 477 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ZNF816-ZNF321PA0A0X1KG74 233 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 LOC390937A0A1W2PQ73 354 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 ANKRD61A6NGH8 418 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 CCRL2O00421 344 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 CDKN1AP38936 164 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 MMP15P51511 669 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 RPS11P62280 158 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIME1-202ENST00000444951 PRDX4Q13162 271 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 GPR50Q13585 617 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 OR8G1Q15617 311 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 MOB3CQ70IA8 216 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 DTX2Q86UW9 622 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 FTMTQ8N4E7 242 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 ORAI1Q96D31 301 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
LIME1-202ENST00000444951 ADAT1Q9BUB4 502 aaKnown RBP14.65□□□□□ -0.06
LIME1-202ENST00000444951 GSX2Q9BZM3 304 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 ZNF275Q9NSD4 429 aaPredicted RBP14.65□□□□□ -0.06
LIME1-202ENST00000444951 SCOCQ9UIL1 159 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 PMF1-BGLAPU3KQ54 211 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 HIVEP2P31629 2446 aa14.65□□□□□ -0.06
LIME1-202ENST00000444951 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 TPD52L2O43399 206 aaKnown RBP14.64□□□□□ -0.07
LIME1-202ENST00000444951 CD1AP06126 327 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 JUNBP17275 347 aaPredicted RBP14.64□□□□□ -0.07
LIME1-202ENST00000444951 Q499Y3 187 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 ACSM3Q53FZ2 586 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 CEP78Q5JTW2 689 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 PLCXD3Q63HM9 321 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 C11orf71Q6IPW1 123 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 CEACAM19Q7Z692 300 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 MS4A15Q8N5U1 240 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 CCDC54Q8NEL0 328 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 OR13G1Q8NGZ3 307 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 NPRL2Q8WTW4 380 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 TMIGD2Q96BF3 282 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 SLC30A2Q9BRI3 323 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 CYSLTR2Q9NS75 346 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 NDUFB11Q9NX14 153 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 MRPL15Q9P015 296 aaKnown RBP14.64□□□□□ -0.07
LIME1-202ENST00000444951 PLCE1Q9P212 2302 aa14.64□□□□□ -0.07
LIME1-202ENST00000444951 TRBV5-5A0A0J9YX44 114 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 KIAA1324LA8MWY0 1029 aaPredicted RBP14.63□□□□□ -0.07
LIME1-202ENST00000444951 ZNF879B4DU55 563 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 MLNRO43193 412 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 RGS9O75916 674 aaPredicted RBP14.63□□□□□ -0.07
LIME1-202ENST00000444951 NRASP01111 189 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 IGHV1-46P01743 117 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 CD2P06729 351 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 BMP4P12644 408 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 CD36P16671 472 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 GABRA5P31644 462 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 ZMAT1Q5H9K5 638 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 CLVS2Q5SYC1 327 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 ZDHHC23Q8IYP9 409 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 OR8S1Q8NH09 359 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 TMEM106AQ96A25 262 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 ELMOD3Q96FG2 381 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 HIST1H2AAQ96QV6 131 aa14.63□□□□□ -0.07
LIME1-202ENST00000444951 EXOSC4Q9NPD3 245 aaKnown RBP14.63□□□□□ -0.07
LIME1-202ENST00000444951 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
LIME1-202ENST00000444951 SONP18583 2426 aaKnown RBP14.62□□□□□ -0.07
LIME1-202ENST00000444951 DHRS7CA6NNS2 312 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 C17orf100A8MU93 164 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 F5H5P2 479 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 GMDSO60547 372 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 SERPINA3P01011 423 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 CST4P01036 141 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 OCMP0CE72 109 aaPredicted RBP14.62□□□□□ -0.07
LIME1-202ENST00000444951 CCL8P80075 99 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 FABP5Q01469 135 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 TRAM1Q15629 374 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 FAM27D1Q5T7N8 215 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 Q6ZSR3 168 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 OR13C9Q8NGT0 318 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 TRMT10AQ8TBZ6 339 aaKnown RBP14.62□□□□□ -0.07
LIME1-202ENST00000444951 MS4A5Q9H3V2 200 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 NOX4Q9NPH5 578 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 ZNF701Q9NV72 531 aaPredicted RBP14.62□□□□□ -0.07
LIME1-202ENST00000444951 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
LIME1-202ENST00000444951 CGGBP1Q9UFW8 167 aaPredicted RBP14.62□□□□□ -0.07
LIME1-202ENST00000444951 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.61□□□□□ -0.07
LIME1-202ENST00000444951 ANXA2P2A6NMY6 339 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 INAFM1C9JVW0 142 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 GABRPO00591 440 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 TFAP2AP05549 437 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 PAX1P15863 534 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 TNFSF4P23510 183 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 GADD45AP24522 165 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms