RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 FAM90A8PA6NJQ4 464 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 H0YAE9 185 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 NDUFB7P17568 137 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 SPIBQ01892 262 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 LIPEQ05469 1076 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 DEFB121Q5J5C9 76 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 LYPD4Q6UWN0 246 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 MKXQ8IYA7 352 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 OR5K1Q8NHB7 308 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 SLAMF6Q96DU3 332 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 ATP6V1G3Q96LB4 118 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-208ENST00000443046 B9D2Q9BPU9 175 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 OCSTAMPQ9BR26 566 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 COPS4Q9BT78 406 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 ELL3Q9HB65 397 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-208ENST00000443046 KRCC1Q9NPI7 259 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-208ENST00000443046 SAR1AQ9NR31 198 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 ZNF222Q9UK12 451 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 LYSTQ99698 3801 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 A6NDX4 124 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 AKR7A2O43488 359 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 POU1F1P28069 291 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 DCTDP32321 178 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 PYCR1P32322 319 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 MSX2P35548 267 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 CNN3Q15417 329 aaKnown RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 MAPRE2Q15555 327 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 TEX30Q5JUR7 227 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 Q6ZS46 218 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 ZNRF1Q8ND25 227 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 OR52J3Q8NH60 311 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 RPL3LQ92901 407 aaKnown RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 REEP6Q96HR9 211 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 FGF23Q9GZV9 251 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 NSRP1Q9H0G5 558 aaKnown RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 INTS9Q9NV88 658 aaKnown RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 ZNF319Q9P2F9 582 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 NLKQ9UBE8 527 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 CD300AQ9UGN4 299 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 FAM32AQ9Y421 112 aaKnown RBP11.61□□□□□ -0.55
HMGN1-208ENST00000443046 N6AMT1Q9Y5N5 214 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
HMGN1-208ENST00000443046 TMEM210A6NLX4 147 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 ZNF878C9JN71 531 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 NME4O00746 187 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 GSK3AP49840 483 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 RAB13P51153 203 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 SLC7A2P52569 658 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 GMFBP60983 142 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 IL5RAQ01344 420 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 SLC35F1Q5T1Q4 408 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 C8orf82Q6P1X6 216 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-208ENST00000443046 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 CSNK2A3Q8NEV1 391 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 PROKR2Q8NFJ6 384 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 OR5P3Q8WZ94 311 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 SDSLQ96GA7 329 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 RCC1LQ96I51 464 aaKnown RBP11.6□□□□□ -0.55
HMGN1-208ENST00000443046 MICU1Q9BPX6 476 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 PRSS22Q9GZN4 317 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 HEXA-AS1Q9H8Q6 139 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 C19orf12Q9NSK7 152 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 LRP12Q9Y561 859 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 MPC1Q9Y5U8 109 aa11.6□□□□□ -0.55
HMGN1-208ENST00000443046 TBX1O43435 398 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 DIRAS1O95057 198 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 PSG2P11465 335 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 PAICSP22234 425 aaKnown RBP11.59□□□□□ -0.55
HMGN1-208ENST00000443046 CFL1P23528 166 aaKnown RBP11.59□□□□□ -0.55
HMGN1-208ENST00000443046 GNALP38405 381 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 GSSP48637 474 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 CX3CR1P49238 355 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 ENTPD1P49961 510 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 GRB2P62993 217 aaKnown RBP11.59□□□□□ -0.55
HMGN1-208ENST00000443046 SLC35A2P78381 396 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 CD69Q07108 199 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 TAF13Q15543 124 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 TIGD6Q17RP2 521 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 LHFPL4Q7Z7J7 247 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 OR2T4Q8NH00 348 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 RCN3Q96D15 328 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 RTL8AQ9BWD3 113 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 PAPOLGQ9BWT3 736 aaKnown RBP11.59□□□□□ -0.55
HMGN1-208ENST00000443046 CENPMQ9NSP4 180 aa11.59□□□□□ -0.55
HMGN1-208ENST00000443046 TENM2Q9NT68 2774 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 DHRS12A0PJE2 317 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 ANXA2P2A6NMY6 339 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF593O00488 134 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-208ENST00000443046 GSTA4O15217 222 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 RHBDL1O75783 438 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 GLCEO94923 617 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 DUS4LO95620 317 aaKnown RBP11.58□□□□□ -0.56
HMGN1-208ENST00000443046 CST4P01036 141 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms