RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NKPD1Q17RQ9 610 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SLC25A35Q3KQZ1 300 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PIP5KL1Q5T9C9 394 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FAM151BQ6UXP7 276 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 C5orf24Q7Z6I8 188 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SLC35E3Q7Z769 313 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GBGT1Q8N5D6 347 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR5B17Q8NGF7 314 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR51F2Q8NH61 342 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 NFKBIDQ8NI38 313 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 Q8WTZ3 238 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 THAP4Q8WY91 577 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 MAL2Q969L2 176 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 LOXL4Q96JB6 756 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TMEM56Q96MV1 263 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PRRT1Q99946 306 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 NDC1Q9BTX1 674 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FZD8Q9H461 694 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 POFUT1Q9H488 388 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PLEKHA2Q9HB19 425 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SRA1Q9HD15 236 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 HIF1ANQ9NWT6 349 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ASB6Q9NWX5 421 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ABI3Q9P2A4 366 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TBC1D29Q9UFV1 150 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TESQ9UGI8 421 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF107Q9UII5 783 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 FBXW11Q9UKB1 542 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CLEC4EQ9ULY5 219 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CORO2BQ9UQ03 480 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 LAMP3Q9UQV4 416 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TMEM56-RWDD3S4R434 201 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF236Q9UL36 1845 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TRAV30A0A087WSZ9 112 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CPSF4LA6NMK7 179 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF724A8MTY0 619 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 J3QLW9 94 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 HSD17B6O14756 317 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FGF16O43320 207 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 EIF4E2O60573 245 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 SRPX2O60687 465 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 SCGB2A1O75556 95 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SEMA4FO95754 770 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GPANK1O95872 356 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 C4BPAP04003 597 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ITGB2P05107 769 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 VSIG10L2P0DP72 767 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PSG1P11464 419 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PTHLHP12272 177 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD1DP15813 335 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PNLIPP16233 465 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GLB1P16278 677 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF19P17023 458 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PPIBP23284 216 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 OMGP23515 440 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PSMB6P28072 239 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CORO1AP31146 461 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 APOBEC3AP31941 199 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 LPAR6P43657 344 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ASCL1P50553 236 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CLDN12P56749 244 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FXYD6P3P58550 94 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ERVPABLB-1P60509 514 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 IL13RA1P78552 427 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CYCSP99999 105 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 BAXQ07812 192 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CRMP1Q14194 572 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CPSF6Q16630 551 aaKnown RBP eCLIP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ACSM3Q53FZ2 586 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 UBE2NLQ5JXB2 153 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 DRAM2Q6UX65 266 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD300LGQ6UXG3 332 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 DPPA3Q6W0C5 159 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FCRLAQ7L513 359 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR8I2Q8N0Y5 310 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 WDTC1Q8N5D0 677 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 C2CD4AQ8NCU7 369 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 BHLHE23Q8NDY6 225 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TMEM104Q8NE00 496 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR52R1Q8NGF1 315 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR10G6Q8NH81 332 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 VN1R17PQ8TDU5 208 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PLD4Q96BZ4 506 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 BOD1Q96IK1 185 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF479Q96JC4 524 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 APOLD1Q96LR9 279 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 HIST1H2AAQ96QV6 131 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 MACROD1Q9BQ69 325 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GINS3Q9BRX5 216 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GTSF1LQ9H1H1 148 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SIDT1Q9NXL6 827 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 FRRS1LQ9P0K9 344 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CLN8Q9UBY8 286 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SLC5A6Q9Y289 635 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF337Q9Y3M9 751 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TBL2Q9Y4P3 447 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 NIPBLQ6KC79 2804 aaeCLIP2.49□□□□□ -2.01
LIG4-203ENST00000442234 BORCS7-ASMTA0A0B4J1R7 106 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 A0A1W2PNR3 127 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 A0A1W2PQH9 124 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms