RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 UBCP0CG48 685 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF12P17014 697 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 CFHR2P36980 270 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 ZMYND11Q15326 602 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 WDR38Q5JTN6 314 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM244Q5VVB8 128 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 KLHL36Q8N4N3 616 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 OR1M1Q8NGA1 313 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 OR14K1Q8NGZ2 314 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 C10orf35Q96D05 121 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 C4orf36Q96KX1 117 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 HIST1H2AAQ96QV6 131 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 YAE1D1Q9NRH1 226 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 PLCXD1Q9NUJ7 323 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 UFSP2Q9NUQ7 469 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 PIGLQ9Y2B2 252 aa12.64□□□□□ -0.39
CSNK1E-210ENST00000442216 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 IGHV3-64DA0A0J9YX35 117 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 A0A1B0GVI7 797 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 J3QLW9 94 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 P2RY10O00398 339 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 SYT7O43581 403 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 LMX1BO60663 402 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 TGFAP01135 160 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 ISG15P05161 165 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 GRPP07492 148 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF19P17023 458 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 DVL1P1P54792 670 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 AQP4P55087 323 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF154Q13106 437 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 MED21Q13503 144 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 CEACAM21Q3KPI0 293 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM42Q69YG0 159 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF771Q7L3S4 317 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PRSS35Q8N3Z0 413 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 OR5A2Q8NGI9 324 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PATZ1Q9HBE1 687 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 TRIM36Q9NQ86 728 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 KCNS2Q9ULS6 477 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PCDHB10Q9UN67 800 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 DIMT1Q9UNQ2 313 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 EXOSC1Q9Y3B2 195 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-210ENST00000442216 OR5B21A6NL26 309 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 A6NLC8 198 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 FAM157AC9JC47 383 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 NRASP01111 189 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 LHBP01229 141 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 LIMS3P0CW19 117 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 LIMS4P0CW20 117 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 FAHP16930 419 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 PCMT1P22061 227 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 PSMB10P40306 273 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 KIR3DL2P43630 455 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 HSPA13P48723 471 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 GNG3P63215 75 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 CSNK2BP67870 215 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 ALKBH1Q13686 389 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF404Q494X3 552 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 CLVS2Q5SYC1 327 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 OR51F2Q8NH61 342 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 HPSE2Q8WWQ2 592 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 RNF170Q96K19 258 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 PPP1R3EQ9H7J1 279 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM165Q9HC07 324 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 C1orf123Q9NWV4 160 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 CAB39Q9Y376 341 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-210ENST00000442216 EFCAB10A6NFE3 127 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 F5H0A9 414 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 MSMBP08118 114 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 MYL12AP19105 171 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 THBS2P35442 1172 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 TGM4P49221 684 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 GBX2P52951 348 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 NANOS3P60323 173 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 LAIR2Q6ISS4 152 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 WDR82Q6UXN9 313 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 TMPRSS11AQ6ZMR5 421 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 GLCCI1Q86VQ1 547 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 GCSAMQ8N6F7 178 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 GGHQ92820 318 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM80Q96HE8 168 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 TECTBQ96PL2 329 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms