RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 B9D1Q9UPM9 204 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMED7Q9Y3B3 224 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 N6AMT1Q9Y5N5 214 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 FKBP7Q9Y680 259 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CACNG2Q9Y698 323 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM14AQ9Y6G1 99 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 V9GY05 133 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DOCK7Q96N67 2140 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 HEATR5BQ9P2D3 2071 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUMA1Q14980 2115 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A087WYN8 130 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGHV3-20A0A0C4DH32 117 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRBV5-5A0A0J9YX44 114 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRBV11-1A0A0K0K1C0 115 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PP11 408 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 hDV102S1A0JD36 115 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRSS37A4D1T9 235 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NAP1L6A6NFF2 107 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 A6NIN4 97 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 A6NIZ1 184 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ACOD1A6NK06 481 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 VSTM2BA6NLU5 285 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM212A6NML5 194 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 IFITM5A6NNB3 132 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRR32B1ATL7 298 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 IDSB3KWA1 339 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 C11orf98E9PRG8 122 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 H7C1C5 153 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 AIPO00170 330 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DCTN6O00399 190 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF593O00488 134 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLPP3O14495 311 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CTDSPLO15194 276 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PIN1P1O15428 100 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 YKT6O15498 198 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SPINT2O43291 252 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HSPA12AO43301 675 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF208O43345 1280 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GSTZ1O43708 216 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LANCL1O43813 399 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LMX1BO60663 402 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC16A7O60669 478 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NPIPB7O75200 414 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SCRG1O75711 98 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 B3GALNT1O75752 331 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZFAND5O76080 213 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 AKR7A3O95154 331 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAS8-AS1O95177 125 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PMS2P2O95744 297 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ECDO95905 644 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PAHP00439 452 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CGAP01215 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGHMP01871 453 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DCNP07585 359 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 YES1P07947 543 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CD3GP09693 182 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GSTT2BP0CG30 244 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR8G3PP0DMU2 310 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CALCBP10092 127 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CRABP1P29762 137 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC6A1P30531 599 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HOXA6P31267 233 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 EVI2BP34910 448 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DUSP3P51452 185 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NKX2-5P52952 324 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SNU13P55769 128 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAP1BP61224 184 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPL27P61353 136 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RRAS2P62070 204 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SNRPEP62304 92 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LCN6P62502 163 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAP1AP62834 184 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPS15P82914 257 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RASGEF1BQ0VAM2 473 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZP4Q12836 540 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAGE2BQ13066 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC17A1Q14916 467 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ACKR1Q16570 336 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NDUFA5Q16718 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CLPPQ16740 277 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TATDN3Q17R31 274 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HLA-BQ31612 363 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC36A2Q495M3 483 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZFP69Q49AA0 526 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAGE2EQ4V326 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HES5Q5TA89 166 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC22A10Q63ZE4 541 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRR27Q6MZM9 219 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAGE2AQ6NT46 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ADAM5Q6NVV9 412 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GUSBP11Q6P575 273 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 KCTD18Q6PI47 426 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DNM1P34Q6PK57 102 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRN1Q6UXK5 716 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 STAC2Q6ZMT1 411 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 COX15Q7KZN9 410 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 KCTD9Q7L273 389 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms