RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 CALRP27797 417 aaKnown RBP10.82□□□□□ -0.68
SCLT1-202ENST00000439369 RANBP1P43487 201 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 PPOXP50336 477 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 ZNF81P51508 661 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 INSL4Q14641 139 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 CTF1Q16619 201 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 MST1LQ2TV78 715 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 PCGF3Q3KNV8 242 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 CEACAM21Q3KPI0 293 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 ZNF295-AS1Q8N0V1 137 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 OR5AS1Q8N127 324 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 BHLHE23Q8NDY6 225 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 OR1M1Q8NGA1 313 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 OR5P3Q8WZ94 311 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 PIGCQ92535 297 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 RPL3LQ92901 407 aaKnown RBP10.82□□□□□ -0.68
SCLT1-202ENST00000439369 TRMT61AQ96FX7 289 aaKnown RBP10.82□□□□□ -0.68
SCLT1-202ENST00000439369 MICU1Q9BPX6 476 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 ADAT1Q9BUB4 502 aaKnown RBP10.82□□□□□ -0.68
SCLT1-202ENST00000439369 RTL8AQ9BWD3 113 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 FAM192AQ9GZU8 254 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 C14orf119Q9NWQ9 140 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 TAS2R4Q9NYW5 299 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 MYEF2Q9P2K5 600 aaKnown RBP10.82□□□□□ -0.68
SCLT1-202ENST00000439369 SLC7A11Q9UPY5 501 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 CEPT1Q9Y6K0 416 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 CADP27708 2225 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 TRAV8-7A0A075B6U6 113 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 TMEM210A6NLX4 147 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 ZNF850A8MQ14 1090 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 H3BSH0 61 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 MAGEB3O15480 346 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 LILRA1O75019 489 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 TMEM127O75204 238 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 IL1AP01583 271 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 CD55P08174 381 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 CD37P11049 281 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 PRF1P14222 555 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 CA6P23280 308 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 TNFSF4P23510 183 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 BDKRB2P30411 391 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 MAGEB1P43366 347 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 FUT6P51993 359 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 PRSS12P56730 875 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 OR8G1Q15617 311 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 UBE2V2Q15819 145 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 FAM27D1Q5T7N8 215 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 PLCXD3Q63HM9 321 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 ASPHD2Q6ICH7 369 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 C11orf71Q6IPW1 123 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 Q6ZR03 302 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 LHFPL2Q6ZUX7 228 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 OR13C9Q8NGT0 318 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 ISOC1Q96CN7 298 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 ITPKCQ96DU7 683 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 CENPOQ9BU64 300 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 TRAF4Q9BUZ4 470 aaPredicted RBP10.81□□□□□ -0.68
SCLT1-202ENST00000439369 CXXC4Q9H2H0 198 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 PPIL3Q9H2H8 161 aaKnown RBP10.81□□□□□ -0.68
SCLT1-202ENST00000439369 PLEKHF2Q9H8W4 249 aa10.81□□□□□ -0.68
SCLT1-202ENST00000439369 HELZ2Q9BYK8 2649 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 ADGRG4Q8IZF6 3080 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 A0A1W2PPK0 400 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 PQLC2LA1A4F0 135 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 A6NHS1 94 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 ZSCAN5BA6NJL1 495 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 C17orf100A8MU93 164 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 PTBP3O95758 552 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 OCMP0CE72 109 aaPredicted RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 AZGP1P25311 298 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 CD200P41217 278 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 GNG3P63215 75 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 USP43Q70EL4 1123 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 MOB3CQ70IA8 216 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 LRRTM1Q86UE6 522 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 OR8S1Q8NH09 359 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 FOXRED1Q96CU9 486 aaPredicted RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 DGCR14Q96DF8 476 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 NAA50Q9GZZ1 169 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 UBTD1Q9HAC8 227 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 DYNLRB1Q9NP97 96 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 GPR173Q9NS66 373 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 RSL24D1Q9UHA3 163 aaKnown RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 PMF1-BGLAPU3KQ54 211 aa10.8□□□□□ -0.68
SCLT1-202ENST00000439369 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
SCLT1-202ENST00000439369 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 TRIM64BA6NI03 449 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 A6NIN4 97 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 H7C417 338 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 MLNRO43193 412 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 CFPP27918 469 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 ALDH3B1P43353 468 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 SRP9P49458 86 aaKnown RBP10.79□□□□□ -0.68
SCLT1-202ENST00000439369 RBP2P50120 134 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 ATP1B3P54709 279 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 TESK1Q15569 626 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms