RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 EDDM3AQ14507 147 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TSNQ15631 228 aaKnown RBP2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC25A35Q3KQZ1 300 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 ARHGAP11BQ3KRB8 267 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 LIN52Q52LA3 116 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 KLHL12Q53G59 568 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 PYCR3Q53H96 274 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM97Q5BJF2 176 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TECRLQ5HYJ1 363 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 MS4A13Q5J8X5 152 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TPTE2P1Q5T6R2 138 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 C8orf82Q6P1X6 216 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM207Q6UWW9 146 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 C12orf54Q6X4T0 127 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 Q6ZVH6 145 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRR22Q8IZ63 422 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC22A15Q8IZD6 547 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF383Q8NA42 475 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR4F15Q8NGB8 312 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR4K17Q8NGC6 315 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR10G9Q8NGN4 311 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR1P1Q8NH06 330 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR1L3Q8NH93 324 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 MAPK15Q8TD08 544 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 SDR42E1Q8WUS8 393 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 APOBEC4Q8WW27 367 aaKnown RBP2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TRUB1Q8WWH5 349 aaKnown RBP2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 IL1F10Q8WWZ1 152 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 ASB17Q8WXJ9 295 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 DDIT4LQ96D03 193 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 SMIM12Q96EX1 92 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 RARRES2Q99969 163 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR51I1Q9H343 314 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TXNIPQ9H3M7 391 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF442Q9H7R0 627 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 NT5DC2Q9H857 520 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 PLEKHA3Q9HB20 300 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 BIN3Q9NQY0 253 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 TRAPPC4Q9Y296 219 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRELID3BQ9Y3B1 194 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 CEP152O94986 1710 aa2.96□□□□□ -1.94
HMGB1P12-201ENST00000438594 SYNMO15061 1565 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 RIMS2Q9UQ26 1411 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TAF1P21675 1872 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 DAPL1A0PJW8 107 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRORSD1PA6NEY8 169 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 K7EP13 123 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ATP6V0E1O15342 81 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 MBTPS2O43462 519 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 RAD51CO43502 376 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ICOSLGO75144 302 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAGE7O76087 117 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 NDUFB8O95169 186 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CLDN14O95500 239 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CLDN1O95832 211 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR10J4P0C629 311 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAGE12FP0CL80 117 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAGE12GP0CL81 117 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAGE12IP0CL82 117 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 FOLR1P15328 257 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PAX1P15863 534 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TCP1P17987 556 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 USF1P22415 310 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CXCR1P25024 350 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 S100PP25815 95 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ADORA2BP29275 332 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SHC1P29353 583 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SERPINB5P36952 375 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TSFMP43897 325 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 RORCP51449 518 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 RAB38P57729 211 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SNRPD1P62314 119 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PSG4Q00888 419 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TWF1Q12792 350 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAGE4Q13068 117 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CLINT1Q14677 625 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GINS1Q14691 196 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 KIR2DS3Q14952 304 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 WHAMMP3Q1A5X7 153 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 LRRC36Q1X8D7 754 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SYT6Q5T7P8 510 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 C1orf195Q5TG92 126 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GFI1BQ5VTD9 330 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM215Q68D42 235 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SFXN4Q6P4A7 337 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 XKRXQ6PP77 449 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 BAIAP2L2Q6UXY1 529 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TFAP2EQ6VUC0 442 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF793Q6ZN11 406 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 FAM231DQ6ZW35 169 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 COMMD7Q86VX2 200 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CATSPER3Q86XQ3 398 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 KIRREL3Q8IZU9 778 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC34A3Q8N130 599 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GAPTQ8N292 157 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GPD1LQ8N335 351 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms