RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR56B1Q8NGI3 324 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 OR2AE1Q8NHA4 323 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 MS4A3Q96HJ5 214 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 SLC25A21Q9BQT8 299 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-216ENST00000437340 NICN1Q9BSH3 213 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 PRDM14Q9GZV8 571 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 FABP7O15540 132 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 ACKR3P25106 362 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 A0A0A6YYD4 124 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 XRCC2O43543 280 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 CRTAPO75718 401 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-216ENST00000437340 COX5BP10606 129 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 FCGR2AP12318 317 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 GNB3P16520 340 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 RPS27AP62979 156 aaKnown RBP22.37■■□□□ 1.17
CPNE1-216ENST00000437340 SLC36A1Q7Z2H8 476 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 FAM89BQ8N5H3 189 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 FDCSPQ8NFU4 85 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 RAB3CQ96E17 227 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 SEC22CQ9BRL7 303 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 C1QTNF5Q9BXJ0 243 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 ALX4Q9H161 411 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-216ENST00000437340 SPRR3Q9UBC9 169 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 SCP2D1Q9UJQ7 156 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF175Q9Y473 711 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF407Q9C0G0 2248 aa22.37■■□□□ 1.17
CPNE1-216ENST00000437340 PRKACBP22694 351 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 MPZP25189 248 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 CNN3Q15417 329 aaKnown RBP22.36■■□□□ 1.17
CPNE1-216ENST00000437340 C3AR1Q16581 482 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 PNLIPRP3Q17RR3 467 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 TMEM42Q69YG0 159 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 SPICQ8N5J4 248 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 NPRL2Q8WTW4 380 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 TNFAIP8L1Q8WVP5 186 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 S100A13Q99584 98 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 RTTNQ86VV8 2226 aa22.36■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF735P0CB33 412 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 HIST1H1DP16402 221 aaKnown RBP22.35■■□□□ 1.17
CPNE1-216ENST00000437340 TBPP20226 339 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 ZMYND11Q15326 602 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 SF3B4Q15427 424 aaKnown RBP eCLIP22.35■■□□□ 1.171e-7■■■■■ 40
CPNE1-216ENST00000437340 SLC22A6Q4U2R8 563 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 CPEB3Q8NE35 698 aaKnown RBP22.35■■□□□ 1.17
CPNE1-216ENST00000437340 STEAP2Q8NFT2 490 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 TINAGL1Q9GZM7 467 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-216ENST00000437340 BANF2Q9H503 90 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 SLC2A8Q9NY64 477 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 hCG_38984A0A1B0GV85 526 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF891A8MT65 544 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-216ENST00000437340 DISC1C4P0D8 188 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 SMLR1H3BR10 107 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 DNAJC13O75165 2243 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 AMY2AP04746 511 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 FCER2P06734 321 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 ZP1P60852 638 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 CLVS2Q5SYC1 327 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 COLCA1Q6ZS62 124 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 NUDCD2Q8WVJ2 157 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 SPSB4Q96A44 273 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 TMEM246Q9BRR3 403 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF436Q9C0F3 470 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-216ENST00000437340 SLA2Q9H6Q3 261 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 GPR173Q9NS66 373 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 B3GNT2Q9NY97 397 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 BOLA1Q9Y3E2 137 aa22.35■■□□□ 1.17
CPNE1-216ENST00000437340 M0QYG6 137 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 IGHG3P01860 377 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 RLN1P04808 185 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 OR8B8Q15620 311 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 PLAC9Q5JTB6 97 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 IDO2Q6ZQW0 420 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 NUFIP2Q7Z417 695 aaKnown RBP22.34■■□□□ 1.17
CPNE1-216ENST00000437340 C1QL2Q7Z5L3 287 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 ASCC1Q8N9N2 400 aaKnown RBP22.34■■□□□ 1.17
CPNE1-216ENST00000437340 PIGTQ969N2 578 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 TM2D1Q9BX74 207 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 IFT46Q9NQC8 304 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.34■■□□□ 1.171e-7■■■■□ 24.8
CPNE1-216ENST00000437340 PLSCR3Q9NRY6 295 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF69Q9UC07 566 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 ANAPC10Q9UM13 185 aa22.34■■□□□ 1.17
CPNE1-216ENST00000437340 A0A1W2PP11 408 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 SOCS1O15524 211 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 EFSO43281 561 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 VSIG10L2P0DP72 767 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 GNG2P59768 71 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 FAM3AP98173 230 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 RNASE10Q5GAN6 216 aaKnown RBP22.33■■□□□ 1.17
CPNE1-216ENST00000437340 BPIFB2Q8N4F0 458 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 OR5D18Q8NGL1 313 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 PRRT1Q99946 306 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 CSAG2Q9Y5P2 127 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 SPTBN4Q9H254 2564 aa22.33■■□□□ 1.17
CPNE1-216ENST00000437340 TRAV17A0A0B4J275 112 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 UBE2QL1A1L167 161 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 SLC22A20A6NK97 555 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 KLK10O43240 276 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 SSX5O60225 188 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 MGMTP16455 207 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms