RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 DHRSXQ8N5I4 330 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 OR1M1Q8NGA1 313 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 PPP1R14AQ96A00 147 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 LGALS12Q96DT0 336 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 ADI1Q9BV57 179 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 PATZ1Q9HBE1 687 aaKnown RBP9.62□□□□□ -0.87
COL28A1-203ENST00000435823 TRIM36Q9NQ86 728 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 G6PC2Q9NQR9 355 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 HIF1ANQ9NWT6 349 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 ENPP5Q9UJA9 477 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 PIGLQ9Y2B2 252 aa9.62□□□□□ -0.87
COL28A1-203ENST00000435823 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
COL28A1-203ENST00000435823 SONP18583 2426 aaKnown RBP9.61□□□□□ -0.87
COL28A1-203ENST00000435823 ABCA2Q9BZC7 2435 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 A0A1B0GVI7 797 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 TMEM210A6NLX4 147 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 CEACAM18A8MTB9 384 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 J3QRE1 110 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 PLPP2O43688 288 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
COL28A1-203ENST00000435823 RAB40BQ12829 278 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 IL18R1Q13478 541 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 CR1LQ2VPA4 569 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF404Q494X3 552 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 TP53I3Q53FA7 332 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 KLHL22Q53GT1 634 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 FAM120AOSQ5T036 256 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF691Q5VV52 312 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 NLRC3Q7RTR2 1065 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 CATSPERDQ86XM0 798 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 BOLLQ8N9W6 283 aaKnown RBP9.61□□□□□ -0.87
COL28A1-203ENST00000435823 OR5P3Q8WZ94 311 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 RORBQ92753 470 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 ITPKCQ96DU7 683 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 RNF170Q96K19 258 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 RNPEPL1Q9HAU8 725 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 TMEM165Q9HC07 324 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 AMBNQ9NP70 447 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 INPP5EQ9NRR6 644 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 MIOXQ9UGB7 285 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 SLC22A13Q9Y226 551 aa9.61□□□□□ -0.87
COL28A1-203ENST00000435823 A0A0G2JMP0 313 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 A0A0X1KG70 313 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 IRGMA1A4Y4 181 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 LGALS8O00214 317 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 P2RY10O00398 339 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 SYT7O43581 403 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 CLIC3O95833 236 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 FAHP16930 419 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 CAPGP40121 348 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 PSMB10P40306 273 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ISL1P61371 349 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 LCN2P80188 198 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 SLC34A1Q06495 639 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF154Q13106 437 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ODF4Q2M2E3 257 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ESCO2Q56NI9 601 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 CEP78Q5JTW2 689 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 FAM201AQ5SY85 155 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 PLCXD3Q63HM9 321 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 FAHD2BQ6P2I3 314 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF826PQ6ZT77 177 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 MOB3CQ70IA8 216 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 KRT74Q7RTS7 529 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 TEX29Q8N6K0 151 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 CCDC54Q8NEL0 328 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 OR4M2Q8NGB6 313 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 OR8B3Q8NGG8 313 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 APH1BQ8WW43 257 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-203ENST00000435823 FAHD2AQ96GK7 314 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 OR8B2Q96RD0 313 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 TMEM246Q9BRR3 403 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 ALG8Q9BVK2 526 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 PPP1R3EQ9H7J1 279 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 PLEKHA1Q9HB21 404 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
COL28A1-203ENST00000435823 TRAV38-1A0A0B4J264 116 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 A0A1B0GTI1 187 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OOEPA6NGQ2 149 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OR5B21A6NL26 309 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 DHRS7CA6NNS2 312 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 F5H0A9 414 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 H0YAE9 185 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 H0YHG0 523 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 J3QLW9 94 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CDIPTO14735 213 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 NRASP01111 189 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 IFNA2P01563 188 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 IGHA1P01876 353 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 HTR1AP08908 422 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 WNT2P09544 360 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 FAM157CP0CG43 387 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 UBCP0CG48 685 aaKnown RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF12P17014 697 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 ZNF19P17023 458 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms