RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 NGFP01138 241 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 BMP4P12644 408 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 ZNF83P51522 516 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 PRSS12P56730 875 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 TNK1Q13470 666 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 GK2Q14410 553 aaPredicted RBP9.7□□□□□ -0.86
LINC00539-203ENST00000434601 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 SSX8Q7RTT4 187 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 TGIF2LYQ8IUE0 185 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 ZNF671Q8TAW3 534 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 TRMT10AQ8TBZ6 339 aaKnown RBP9.7□□□□□ -0.86
LINC00539-203ENST00000434601 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 ITFG2Q969R8 447 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 POM121Q96HA1 1249 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 MRI1Q9BV20 369 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
LINC00539-203ENST00000434601 WDR12Q9GZL7 423 aaKnown RBP9.7□□□□□ -0.86
LINC00539-203ENST00000434601 MIXL1Q9H2W2 232 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 OR51B6Q9H340 312 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 PLGRKTQ9HBL7 147 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 ABCB9Q9NP78 766 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 TMEM138Q9NPI0 162 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 NPAP1Q9NZP6 1156 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 ADAM30Q9UKF2 790 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 STARD10Q9Y365 291 aa9.7□□□□□ -0.86
LINC00539-203ENST00000434601 A0A0B4J203 849 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 IGHV2OR16-5A0A0B4J2B6 119 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ZNF816-ZNF321PA0A0X1KG74 233 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 M0R1B8 84 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 HPGDSO60760 199 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ALX3O95076 343 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 HCKP08631 526 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 FAM157BP0CG42 384 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 CALCBP10092 127 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ZNF35P13682 527 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 DNASE1P24855 282 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ETV6P41212 452 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 SCAND1P57086 179 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 PPP1CBP62140 327 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 HLXQ14774 488 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ZNF846Q147U1 533 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 CNN3Q15417 329 aaKnown RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 RAB11BQ15907 218 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 FBXL19-AS1Q494R0 122 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 TMEM42Q69YG0 159 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 SEZ6L2Q6UXD5 910 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 UNQ6126/PRO20091Q6UXV3 157 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 OR5AS1Q8N127 324 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 OR56B2PQ8NGI1 322 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 OR52N4Q8NGI2 321 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 OR6M1Q8NGM8 313 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 FOXRED1Q96CU9 486 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 CLEC4MQ9H2X3 399 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 METTL17Q9H7H0 456 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 CGGBP1Q9UFW8 167 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-203ENST00000434601 STEAP1Q9UHE8 339 aa9.69□□□□□ -0.86
LINC00539-203ENST00000434601 ABCA2Q9BZC7 2435 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 IGKV1-9A0A0C4DH69 117 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 GGT3PA6NGU5 568 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 MAGEB3O15480 346 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 PAHP00439 452 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 ALDOBP05062 364 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 OCMP0CE72 109 aaPredicted RBP9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CD37P11049 281 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 FOSL1P15407 271 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 PPP3CBP16298 524 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 AZGP1P25311 298 aaKnown RBP9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CALCRP30988 508 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 TNFSF8P32971 234 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 UCP2P55851 309 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CLDN12P56749 244 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 NAAAQ02083 359 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 UBE2V2Q15819 145 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 SPANXN2Q5MJ10 180 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CLVS2Q5SYC1 327 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 SPATA46Q5T0L3 261 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 FAM166AQ6J272 317 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 ALKBH2Q6NS38 261 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 FBXW12Q6X9E4 464 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 LYPD6Q86Y78 171 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CDH26Q8IXH8 852 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 FTMTQ8N4E7 242 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 JAGN1Q8N5M9 183 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 CSNK2A3Q8NEV1 391 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 OR1J1Q8NGS3 322 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 OR5H6Q8NGV6 325 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 FAM222BQ8WU58 562 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 ZFAND2BQ8WV99 257 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 NRGNQ92686 78 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 PIGTQ969N2 578 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 SPSB1Q96BD6 273 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 TECTBQ96PL2 329 aa9.68□□□□□ -0.86
LINC00539-203ENST00000434601 SORCS2Q96PQ0 1159 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms