RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 TOR1AO14656 332 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 SERPINA2P20848 420 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 ADH6P28332 368 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 EPHA8P29322 1005 aaPredicted RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 BLVRBP30043 206 aaPredicted RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 PI4KAP42356 2102 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CXCL12P48061 93 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CSNK1A1P48729 337 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CSNK2A1P68400 391 aaPredicted RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 CYCSP99999 105 aaKnown RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 UBE2V2Q15819 145 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 AADACL3Q5VUY0 350 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 GTPBP8Q8N3Z3 284 aaPredicted RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 FAM89BQ8N5H3 189 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CSNK2A3Q8NEV1 391 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 PAQR8Q8TEZ7 354 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 ELL3Q9HB65 397 aaPredicted RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 COL6A3P12111 3177 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 LOC102725191A0A1B0GVB3 256 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 MSGN1A6NI15 193 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 FAM74A7A6NL05 159 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CEACAM18A8MTB9 384 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 TP53I11O14683 189 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 PNLIPP16233 465 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 MSR1P21757 451 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 FPR2P25090 351 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 H3F3AP84243 136 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 ZNF239Q16600 458 aaKnown RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 MRPL14Q6P1L8 145 aaKnown RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 SHDQ96IW2 340 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 DUSP23Q9BVJ7 150 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 METTL8Q9H825 291 aaKnown RBP10.37□□□□□ -0.75
CD44-209ENST00000433892 RAB18Q9NP72 206 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 EHFQ9NZC4 300 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 CELSR3Q9NYQ7 3312 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 F8VVB4 439 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 F8VWA3 439 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 HPNP05981 417 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 DBHP09172 617 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 FCGR2AP12318 317 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 PRF1P14222 555 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 LSM6P62312 80 aaKnown RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 AIMP2Q13155 320 aaKnown RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 ENDOGQ14249 297 aaKnown RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 FAM189A2Q15884 450 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 RSPO1Q2MKA7 263 aaPredicted RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 RAET1LQ5VY80 246 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 BAP18Q8IXM2 172 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 CCDC36Q8IYA8 594 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 GJC3Q8NFK1 279 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 STOML3Q8TAV4 291 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 TMED6Q8WW62 240 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 PIGTQ969N2 578 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 CDC6Q99741 560 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 RBM24Q9BX46 236 aaKnown RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 SLC26A1Q9H2B4 701 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 NELFAQ9H3P2 528 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 CYTL1Q9NRR1 136 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 TNRC18O15417 2968 aaPredicted RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 DHRS3O75911 302 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 ONECUT2O95948 504 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 NAT2P11245 290 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 CTSSP25774 331 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 CBX5P45973 191 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 PCOLCEQ15113 449 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 NKAPLQ5M9Q1 402 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 JSRP1Q96MG2 331 aaPredicted RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 PECRQ9BY49 303 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
CD44-209ENST00000433892 SLC39A1Q9NY26 324 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 OSGIN2Q9Y236 505 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 PIGLQ9Y2B2 252 aa10.36□□□□□ -0.75
CD44-209ENST00000433892 FOXI3A8MTJ6 420 aaPredicted RBP10.35□□□□□ -0.75
CD44-209ENST00000433892 FGF16O43320 207 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 TSPAN9O75954 239 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 KNG1P01042 644 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 IGLV3-1P01715 115 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 CCL3P10147 92 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 FKBP2P26885 142 aaKnown RBP10.35□□□□□ -0.75
CD44-209ENST00000433892 TAS2R46P59540 309 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 DRAM2Q6UX65 266 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 Q7L0L9 218 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 GALNTL5Q7Z4T8 443 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 TMEM200AQ86VY9 491 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 OR51F2Q8NH61 342 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 SAP25Q8TEE9 199 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 NABP1Q96AH0 204 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 S100A13Q99584 98 aa10.35□□□□□ -0.75
CD44-209ENST00000433892 ZNF701Q9NV72 531 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms