RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 CHAC2Q8WUX2 184 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 CST11Q9H112 138 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 NUBP2Q9Y5Y2 271 aa12.4□□□□□ -0.42
CALD1-207ENST00000430085 CDC14BO60729 498 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 MPIG6BO95866 241 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TCRBP04435 133 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 SERPINA5P05154 406 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 LPLP06858 475 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TPOP07202 933 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 FAUP35544 74 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 VEGFCP49767 419 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 CCR6P51684 374 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 MTCP1P56278 107 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 ACTBP60709 375 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 ACTG1P63261 375 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 CD300CQ08708 224 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TBR1Q16650 682 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 VWA1Q6PCB0 445 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 MRPL21Q7Z2W9 205 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 CCDC36Q8IYA8 594 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 EXTL1Q92935 676 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 SCPEP1Q9HB40 452 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 MCUBQ9NWR8 336 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TP53TG5Q9Y2B4 290 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TRAV6A0A075B6T7 132 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 ZNF816-ZNF321PA0A0X1KG74 233 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 FAM230AA0A1W2PPH8 454 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 MEIS3P1A6NDR6 274 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 RAB27BO00194 218 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 LYZL6O75951 148 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 CHRM2P08172 466 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 RAB25P57735 213 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 KRTCAP3Q53RY4 240 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 ZBTB37Q5TC79 503 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 TMEM104Q8NE00 496 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 GPX8Q8TED1 209 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 RNF170Q96K19 258 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 NUDT16L1Q9BRJ7 211 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 URM1Q9BTM9 101 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
CALD1-207ENST00000430085 KCNN3Q9UGI6 736 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
CALD1-207ENST00000430085 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 BSNQ9UPA5 3926 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 A0A0B4J293 547 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 WDR1O75083 606 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 DHFRP00374 187 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 HOXC12P31275 282 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 ALDH3B1P43353 468 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 BTG1P62324 171 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
CALD1-207ENST00000430085 OLFML2AQ68BL7 652 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 TMEM42Q69YG0 159 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 SFRP4Q6FHJ7 346 aaPredicted RBP12.38□□□□□ -0.43
CALD1-207ENST00000430085 Q6ZTK2 550 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 SLC30A7Q8NEW0 376 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 OR10R2Q8NGX6 335 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 PIGCQ92535 297 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 SEH1LQ96EE3 360 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 BORCS8Q96FH0 119 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 BANF2Q9H503 90 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 ELL3Q9HB65 397 aaPredicted RBP12.38□□□□□ -0.43
CALD1-207ENST00000430085 ALG5Q9Y673 324 aa12.38□□□□□ -0.43
CALD1-207ENST00000430085 BOD1L1Q8NFC6 3051 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
CALD1-207ENST00000430085 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
CALD1-207ENST00000430085 TMEM235A6NFC5 223 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
CALD1-207ENST00000430085 FIGNL2A6NMB9 653 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 CCNKO75909 580 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 TMEM225BP0DP42 221 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 NAT2P11245 290 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 GTF2F2P13984 249 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 PTGER4P35408 488 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 RBP2P50120 134 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 FOXF2Q12947 444 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 PLCXD3Q63HM9 321 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 MOB3CQ70IA8 216 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
CALD1-207ENST00000430085 CMBLQ96DG6 245 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
CALD1-207ENST00000430085 LPAR5Q9H1C0 372 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
CALD1-207ENST00000430085 PTTG3PQ9NZH4 202 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms