RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PPA1Q15181 289 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 CLEC18BQ6UXF7 455 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 PEG10Q86TG7 708 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 URM1Q9BTM9 101 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 CACNA1EQ15878 2313 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 FPR2P25090 351 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 SLC9A3R2Q15599 337 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 FAM189A2Q15884 450 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 CRIP3Q6Q6R5 217 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 FAM89BQ8N5H3 189 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 OR10A2Q9H208 303 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
SNRNP200-202ENST00000429650 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 LOC102725191A0A1B0GVB3 256 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 FGF16O43320 207 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 ONECUT2O95948 504 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 PI3P19957 117 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 AMY2BP19961 511 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 CLDN17P56750 224 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 SUPT4H1P63272 117 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 PRAMEF20Q5VT98 475 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 UQCC3Q6UW78 93 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 C1orf122Q6ZSJ8 110 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 LHFPL1Q86WI0 220 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 ZSCAN4Q8NAM6 433 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 LYZL4Q96KX0 146 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 CDC6Q99741 560 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 DEFB126Q9BYW3 111 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 RAB18Q9NP72 206 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 ASF1BQ9NVP2 202 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
SNRNP200-202ENST00000429650 A0A0B4J2A0 478 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 IGHV5-10-1A0A0J9YXX1 117 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 RAB19A4D1S5 217 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 ADAP1O75689 374 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 IGLV3-1P01715 115 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 PRF1P14222 555 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 CTSSP25774 331 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 ADH6P28332 368 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 EIF1P41567 113 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 CCL7P80098 99 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 KISS1Q15726 138 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 SGCAQ16586 387 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 C1QL2Q7Z5L3 287 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 SPEM1Q8N4L4 309 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 OR5D18Q8NGL1 313 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 OR13G1Q8NGZ3 307 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 LIN37Q96GY3 246 aaPredicted RBP11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 PGAM5Q96HS1 289 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 C19orf25Q9UFG5 118 aaPredicted RBP11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 SHPKQ9UHJ6 478 aa11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 CHCHD2Q9Y6H1 151 aaPredicted RBP11.71□□□□□ -0.54
SNRNP200-202ENST00000429650 FAM74A7A6NL05 159 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 MPTX1A8MV57 137 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 TLX3O43711 291 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 PNLIPP16233 465 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 DHPSP49366 369 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 SLC35A1P78382 337 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 ECH1Q13011 328 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 ANKRD55Q3KP44 614 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 AADACL3Q5VUY0 350 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 GTPBP8Q8N3Z3 284 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 PNLDC1Q8NA58 520 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 MICU1Q9BPX6 476 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 ST6GALNAC5Q9BVH7 336 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 NCOR1P1Q9H4R4 102 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 AKIRIN1Q9H9L7 192 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 OSGIN2Q9Y236 505 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 LY6G6EA0A0G2JKS1 128 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 PTGFRP43088 359 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 STARD6P59095 220 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 NAAAQ02083 359 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 BAP18Q8IXM2 172 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
SNRNP200-202ENST00000429650 NPRL2Q8WTW4 380 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms