RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PRSS12P56730 875 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 PRDX4Q13162 271 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 ZDHHC23Q8IYP9 409 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 WFDC11Q8NEX6 87 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 OR10AD1Q8NGE0 317 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 OR8S1Q8NH09 359 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 YIPF5Q969M3 257 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 SMIM19Q96E16 107 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 PAPOLGQ9BWT3 736 aaKnown RBP12.65□□□□□ -0.38
GARNL3-204ENST00000429629 TLNRD1Q9H1K6 362 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-204ENST00000429629 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
GARNL3-204ENST00000429629 ARID1AO14497 2285 aa12.65□□□□□ -0.38
GARNL3-204ENST00000429629 OR5B21A6NL26 309 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 F5H5P2 479 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 LY6HO94772 140 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 NRASP01111 189 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 NR4A2P43354 598 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 GTF2A1P52655 376 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-204ENST00000429629 RDH10Q8IZV5 341 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 PARP16Q8N5Y8 322 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 GPR148Q8TDV2 347 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 PIGCQ92535 297 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 HPS1Q92902 700 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 Q96MF0 132 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 RTL8AQ9BWD3 113 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 TMEM106BQ9NUM4 274 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
GARNL3-204ENST00000429629 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-204ENST00000429629 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 LRRC30A6NM36 301 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 ZNF850A8MQ14 1090 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 LALBAP00709 142 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 MT-ND2P03891 347 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 FAHP16930 419 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 EEF1B2P24534 225 aaKnown RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 GNG3P63215 75 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 TBCEQ15813 527 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 YIF1BQ5BJH7 314 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 XAF1Q6GPH4 301 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 PEG10Q86TG7 708 aaKnown RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 CCL17Q92583 94 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 THRSPQ92748 146 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 GHSRQ92847 366 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 RAB1CQ92928 201 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 PDCD1LG2Q9BQ51 273 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 CHST5Q9GZS9 411 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 FN3KRPQ9HA64 309 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 PLEKHA1Q9HB21 404 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
GARNL3-204ENST00000429629 SIRT4Q9Y6E7 314 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 PRRC2AP48634 2157 aaKnown RBP12.63□□□□□ -0.39
GARNL3-204ENST00000429629 IGHV4-30-2A0A087WSY4 118 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 ANKRD61A6NGH8 418 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 CLDN25C9JDP6 229 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 ACAA1P09110 424 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-204ENST00000429629 TPBGQ13641 420 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 SPRNQ5BIV9 151 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 SVOPQ8N4V2 548 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 MS4A15Q8N5U1 240 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 OR1M1Q8NGA1 313 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 OR11L1Q8NGX0 322 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 HPSE2Q8WWQ2 592 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 SGCDQ92629 289 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 RNF170Q96K19 258 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 PGLYRP3Q96LB9 341 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 SLC7A11Q9UPY5 501 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 LRCH1Q9Y2L9 728 aa12.62□□□□□ -0.39
GARNL3-204ENST00000429629 A0A096LNT2 108 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 CDC14BO60729 498 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 GPX5O75715 221 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 LHBP01229 141 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 CD2P06729 351 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 CELP19835 753 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 PRKACBP22694 351 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 PMELP40967 661 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-204ENST00000429629 FUT6P51993 359 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 MLLT11Q13015 90 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-204ENST00000429629 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 MOB3CQ70IA8 216 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 ZNF573Q86YE8 665 aa12.61□□□□□ -0.39
GARNL3-204ENST00000429629 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms