RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF121P58317 390 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 ABCA11PQ4W5N1 156 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 C9orf135Q5VTT2 229 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 SLC36A1Q7Z2H8 476 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TMEM229BQ8NBD8 167 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TMEM104Q8NE00 496 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 OR10G3Q8NGC4 313 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 MCHR2Q969V1 340 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 GPX7Q96SL4 187 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 ZNF416Q9BWM5 594 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 CHST11Q9NPF2 352 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 DNAJC13O75165 2243 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TNFSF12O43508 249 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 ANGPTL7O43827 346 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 IGHG1P01857 330 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TPT1P13693 172 aaKnown RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 CD27P26842 260 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 CASP6P55212 293 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 MYBPHQ13203 477 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 NKAIN1Q4KMZ8 207 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 FAM76BQ5HYJ3 339 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 H3F3CQ6NXT2 135 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TMPPEQ6ZT21 453 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 ACOT7LQ6ZUV0 252 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 RNF144BQ7Z419 303 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 LYG2Q86SG7 212 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 CATSPERDQ86XM0 798 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 C20orf196Q8IYI0 205 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 LRRC75AQ8NAA5 344 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 OR1S1Q8NH92 325 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 MARC2Q969Z3 335 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 ARHGAP5-AS1Q96IT6 56 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 TMPRSS13Q9BYE2 586 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 NKX6-2Q9C056 277 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 PRMT8Q9NR22 394 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 PLEKHJ1Q9NW61 149 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 PARPBPQ9NWS1 579 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 LRFN1Q9P244 771 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 KLF2Q9Y5W3 355 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 NUP210Q8TEM1 1887 aaPredicted RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 C9orf170A2RU37 121 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 HMSDA8MTL9 139 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 NPIPA2E9PIF3 369 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 NPIPA3F8WFD2 350 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ZNF217O75362 1048 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 MED6O75586 246 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 OR2A4O95047 310 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 IGHV3-9P01782 118 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 HOXD4P09016 255 aaPredicted RBP7.15□□□□□ -1.26
HPS4-205ENST00000429411 NME1P15531 152 aaKnown RBP7.15□□□□□ -1.26
HPS4-205ENST00000429411 FAHP16930 419 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 CNR1P21554 472 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 PSMB6P28072 239 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 LAP3P28838 519 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 CX3CR1P49238 355 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 PNLIPRP2P54317 469 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 MFAP5Q13361 173 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 CBLN2Q8IUK8 224 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 OR5M8Q8NGP6 311 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 CYYR1Q96J86 154 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 OR2A7Q96R45 310 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 C20orf24Q9BUV8 137 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 KCNK7Q9Y2U2 307 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 IGLV1-36A0A0B4J1U3 117 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 IGHV1OR15-9A0A0B4J2B8 117 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 MFSD2BA6NFX1 497 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 GLRA1P23415 457 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ISXQ2M1V0 245 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ZNF684Q5T5D7 378 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 PRR18Q8N4B5 295 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 MR1Q95460 341 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ARL11Q969Q4 196 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 WDR13Q9H1Z4 485 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 ZNF275Q9NSD4 429 aaPredicted RBP7.15□□□□□ -1.26
HPS4-205ENST00000429411 RARRES3Q9UL19 164 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 NPTNQ9Y639 398 aa7.15□□□□□ -1.26
HPS4-205ENST00000429411 IGHV1OR21-1A0A087WYE8 117 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 ZNF98A6NK75 572 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 SHISA7A6NL88 538 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 HSPB6O14558 160 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 NXPH3O95157 252 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 RNF224P0DH78 156 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 CBR1P16152 277 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 CASRP41180 1078 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 PPT1P50897 306 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 CCR5P51681 352 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 SP6Q3SY56 376 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 SPIN3Q5JUX0 258 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 NAA40Q86UY6 237 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 CD300LFQ8TDQ1 290 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 ST7LQ8TDW4 575 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 HOXB13Q92826 284 aaPredicted RBP7.15□□□□□ -1.27
HPS4-205ENST00000429411 ADIPOR1Q96A54 375 aa7.15□□□□□ -1.27
HPS4-205ENST00000429411 DMRTA2Q96SC8 542 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms