RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 A0A1B0GUS0 222 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 CST1P01037 141 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 CRYBA1P05813 215 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 H2BFMP0C1H6 154 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 POU1F1P28069 291 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
SEC13-210ENST00000428626 HCCSP53701 268 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 PRDX4Q13162 271 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 KLRD1Q13241 179 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 TAF9Q16594 264 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
SEC13-210ENST00000428626 SHFQ7M4L6 423 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 PNKDQ8N490 385 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 SCCPDHQ8NBX0 429 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 OR8B12Q8NGG6 310 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 CANT1Q8WVQ1 401 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 OR5P3Q8WZ94 311 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 TNFRSF14Q92956 283 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 ASB9Q96DX5 294 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 GAFA1Q96PS6 74 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 DCTN5Q9BTE1 182 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 KIF17Q9P2E2 1029 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
SEC13-210ENST00000428626 PRPF19Q9UMS4 504 aaKnown RBP12.75□□□□□ -0.37
SEC13-210ENST00000428626 A0A1W2PRD5 423 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 A0A1W2PRF3 423 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 A0A1W2PRM7 423 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 RNASEK-C17orf49H0YIS7 233 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 AKR7A2O43488 359 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 TIPRLO75663 272 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 APOC1P02654 83 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 LYNP07948 512 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 PRKACGP22612 351 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 SLC2A5P22732 501 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 DCTDP32321 178 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 GNALP38405 381 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 DGUOKQ16854 277 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 FAM76BQ5HYJ3 339 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 DMRTC1Q5HYR2 192 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 CPOQ8IVL8 374 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 CSNK2A3Q8NEV1 391 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 THEM6Q8WUY1 208 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 DYRK2Q92630 601 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 C12orf43Q96C57 262 aaKnown RBP12.74□□□□□ -0.37
SEC13-210ENST00000428626 RAB3IPQ96QF0 476 aaPredicted RBP12.74□□□□□ -0.37
SEC13-210ENST00000428626 PKP2Q99959 881 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 SP140LQ9H930 580 aa12.74□□□□□ -0.37
SEC13-210ENST00000428626 A0A1B0GVI7 797 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 RHBDL1O75783 438 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 CST4P01036 141 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 CALB2P22676 271 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 CFL1P23528 166 aaKnown RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 PROK1P58294 105 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 CDK5Q00535 292 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 PDLIM3Q53GG5 364 aaPredicted RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 TMEM236Q5W0B7 351 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 METAP1DQ6UB28 335 aaPredicted RBP12.73□□□□□ -0.37
SEC13-210ENST00000428626 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 Q6ZSV7 163 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 TBC1D15Q8TC07 691 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 PIGCQ92535 297 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 RGCCQ9H4X1 137 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 ZNF391Q9UJN7 358 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 LRP12Q9Y561 859 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 MPC1Q9Y5U8 109 aa12.73□□□□□ -0.37
SEC13-210ENST00000428626 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 PSMD9O00233 223 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 NDUFB3O43676 98 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 ALOX5APP20292 161 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 IL5RAQ01344 420 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 MIDNQ504T8 468 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 ASPHD2Q6ICH7 369 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 BRICD5Q6PL45 260 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 OR10Z1Q8NGY1 313 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 RNF170Q96K19 258 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 RTL8AQ9BWD3 113 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 ELL3Q9HB65 397 aaPredicted RBP12.72□□□□□ -0.37
SEC13-210ENST00000428626 ZNRD1Q9P1U0 126 aa12.72□□□□□ -0.37
SEC13-210ENST00000428626 IGKV1D-17A0A075B6S4 117 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms