RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 KCNK7Q9Y2U2 307 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 DOCK7Q96N67 2140 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 SLC22A20A6NK97 555 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 VSIG10L2P0DP72 767 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 ANXA3P12429 323 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CEACAM1P13688 526 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF24P17028 368 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 TMEM50BP56557 158 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 ZP1P60852 638 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 SSBP1Q04837 148 aaKnown RBP9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CDK10Q15131 360 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-210ENST00000428307 OR2W3Q7Z3T1 314 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 OR51T1Q8NGJ9 327 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 DEDD2Q8WXF8 326 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CHIAQ9BZP6 476 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 B3GNT2Q9NY97 397 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 FBLN5Q9UBX5 448 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 AKAP13Q12802 2813 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 C5orf49A4QMS7 147 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 RPL36A-HNRNPH2H7BZ11 118 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 AKR7A2O43488 359 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 ANGPTL7O43827 346 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 TOXO94900 526 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CHRM2P08172 466 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 SULT1A3P0DMM9 295 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 SULT1A4P0DMN0 295 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 TMEM225BP0DP42 221 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CPN1P15169 458 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 MGMTP16455 207 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 GSK3AP49840 483 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
HDAC9-210ENST00000428307 KRTAP27-1Q3LI81 207 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 BPIFB2Q8N4F0 458 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 ARHGAP5-AS1Q96IT6 56 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 SLC6A7Q99884 636 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 CST11Q9H112 138 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 DLL3Q9NYJ7 618 aa9.05□□□□□ -0.96
HDAC9-210ENST00000428307 MAP1BP46821 2468 aaKnown RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 OR6C65A6NJZ3 312 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 SPRY1O43609 319 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 SSX5O60225 188 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 CREBL2O60519 120 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 MELTFP08582 738 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 NAT2P11245 290 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 EDN3P14138 238 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 GNG2P59768 71 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 RAB1AP62820 205 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 FAM3AP98173 230 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 NRN1LQ496H8 165 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 Q6ZSR3 168 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 TMED4Q7Z7H5 227 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 GCNT2Q8N0V5 402 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 URM1Q9BTM9 101 aaKnown RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 LRFN3Q9BTN0 628 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 IFT46Q9NQC8 304 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 MYO7BQ6PIF6 2116 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 IGKV1-27A0A075B6S5 117 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 MEIKINA0A087WXM9 373 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 TM4SF5O14894 197 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 RAD51DO75771 328 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 SCGNO76038 276 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 NRASP01111 189 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 UBBP0CG47 229 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 HIST1H1DP16402 221 aaKnown RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 HRH1P35367 487 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 NBL1P41271 181 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 CXADRP78310 365 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 CLN3Q13286 438 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 HIKESHIQ53FT3 197 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 RNASE10Q5GAN6 216 aaKnown RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 OR56B1Q8NGI3 324 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 PIGCQ92535 297 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 GPN1Q9HCN4 374 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-210ENST00000428307 CA10Q9NS85 328 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 HSPB11Q9Y547 144 aa9.04□□□□□ -0.96
HDAC9-210ENST00000428307 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 ALX3O95076 343 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF735P0CB33 412 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 BLVRBP30043 206 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-210ENST00000428307 RPS27AP62979 156 aaKnown RBP9.03□□□□□ -0.96
HDAC9-210ENST00000428307 C4orf46Q504U0 113 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF626Q68DY1 528 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 LAMTOR1Q6IAA8 161 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 SLC36A1Q7Z2H8 476 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 CDH24Q86UP0 819 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 LIX1LQ8IVB5 337 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 ZFAND1Q8TCF1 268 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 C1QTNF5Q9BXJ0 243 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF436Q9C0F3 470 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-210ENST00000428307 POFUT1Q9H488 388 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 RNF122Q9H9V4 155 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms