RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CREBBPQ92793 2442 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 ANXA2P2A6NMY6 339 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 PTBP3O95758 552 aaKnown RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 ZNF12P17014 697 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 EEF1B2P24534 225 aaKnown RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 RBMXP38159 391 aaKnown RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 GATA4P43694 442 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 TMEM33P57088 247 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 PRAMEF6Q5VXH4 476 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 TMEM42Q69YG0 159 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 ZDHHC23Q8IYP9 409 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 OR51A4Q8NGJ6 313 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 OR5P3Q8WZ94 311 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 YTHDF1Q9BYJ9 559 aaKnown RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 CCDC90BQ9GZT6 254 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 COMMD4Q9H0A8 199 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 ABCB9Q9NP78 766 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 C14orf119Q9NWQ9 140 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 LSM2Q9Y333 95 aaKnown RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 PMELP40967 661 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 MZT1Q08AG7 82 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 CEP78Q5JTW2 689 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 CLVS2Q5SYC1 327 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 DMKNQ6E0U4 476 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 MOGAT3Q86VF5 341 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 ZFP41Q8N8Y5 198 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 HPSE2Q8WWQ2 592 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 MICU1Q9BPX6 476 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 BPESC1Q9GZL8 116 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 FGF23Q9GZV9 251 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-209ENST00000425836 DCAF16Q9NXF7 216 aa20.68■□□□□ 0.9
VEGFA-209ENST00000425836 NRASP01111 189 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 SLC25A16P16260 332 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 NR4A2P43354 598 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 MPPED2Q15777 294 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 DMRTC1Q5HYR2 192 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 MOB3CQ70IA8 216 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 WDR86Q86TI4 376 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 ZNF420Q8TAQ5 688 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-209ENST00000425836 SMIM19Q96E16 107 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 OR5M11Q96RB7 305 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 REG4Q9BYZ8 158 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 PLEKHA1Q9HB21 404 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 TMEM106BQ9NUM4 274 aa20.67■□□□□ 0.9
VEGFA-209ENST00000425836 RNF223E7ERA6 249 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 GRPP07492 148 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 RPSAP08865 295 aaKnown RBP20.66■□□□□ 0.9
VEGFA-209ENST00000425836 THBS2P35442 1172 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 CDH15P55291 814 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 TAS2R43P59537 309 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 GABARAPL2P60520 117 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 CIARTQ8N365 385 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-209ENST00000425836 ERGIC1Q969X5 290 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 C10orf35Q96D05 121 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 ADAT3Q96EY9 351 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-209ENST00000425836 RNF170Q96K19 258 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 HIST1H2AAQ96QV6 131 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 RTL8AQ9BWD3 113 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 GPR173Q9NS66 373 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 UFSP2Q9NUQ7 469 aa20.66■□□□□ 0.9
VEGFA-209ENST00000425836 PPIHO43447 177 aaKnown RBP20.65■□□□□ 0.9
VEGFA-209ENST00000425836 GPR6P46095 362 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-209ENST00000425836 SLC3A1Q07837 685 aa20.65■□□□□ 0.9
VEGFA-209ENST00000425836 SPHARQ15513 63 aa20.65■□□□□ 0.9
VEGFA-209ENST00000425836 CEACAM21Q3KPI0 293 aa20.65■□□□□ 0.9
VEGFA-209ENST00000425836 OR1M1Q8NGA1 313 aa20.65■□□□□ 0.9
VEGFA-209ENST00000425836 RGP1Q92546 391 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-209ENST00000425836 FGGYQ96C11 551 aa20.65■□□□□ 0.9
VEGFA-209ENST00000425836 A0A096LNT2 108 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 H7C1Q1 480 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 ACSM1Q08AH1 577 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 PLCXD3Q63HM9 321 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 OR5A2Q8NGI9 324 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 OR13C3Q8NGS6 347 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 Q8TCH9 128 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 GHSRQ92847 366 aa20.64■□□□□ 0.9
VEGFA-209ENST00000425836 ANKRD61A6NGH8 418 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 CLDN25C9JDP6 229 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 IFNL4K9M1U5 179 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 MAP2K4P45985 399 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 BDH1Q02338 343 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 MED22Q15528 200 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF181Q2M3W8 571 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 FAM76BQ5HYJ3 339 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 C11orf53Q8IXP5 236 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 PGLYRP3Q96LB9 341 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 CHST5Q9GZS9 411 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 FN3KRPQ9HA64 309 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF281Q9Y2X9 895 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 PNMA8CA0A1B0GUJ8 204 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF732B4DXR9 585 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 TMEM178BH3BS89 294 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 PLPP2O43688 288 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 CELP19835 753 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 GPM6AP51674 278 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF154Q13106 437 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 UBE2V2Q15819 145 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 KCTD8Q6ZWB6 473 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 TMUB1Q9BVT8 246 aa20.63■□□□□ 0.89
VEGFA-209ENST00000425836 C1orf123Q9NWV4 160 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms