RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 AKTIPQ9H8T0 292 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 GRPEL1Q9HAV7 217 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 BCL2L10Q9HD36 194 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 TBC1D23Q9NUY8 699 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 ACTR3BQ9P1U1 418 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 PSMC3IPQ9P2W1 217 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-203ENST00000424270 GRHPRQ9UBQ7 328 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 ATPIF1Q9UII2 106 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 MOB4Q9Y3A3 225 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 MINOS1-NBL1R4GNA1 71 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 HSPE1-MOB4S4R3N1 261 aa4.94□□□□□ -1.62
SDCBP-203ENST00000424270 A0A1W2PPM1 405 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ANXA2P2A6NMY6 339 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 FAM90A22PA8MWA6 464 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ODF3BA8MYP8 253 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 CCRL2O00421 344 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ZSCAN12O43309 604 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 SLC16A7O60669 478 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 KHDRBS3O75525 346 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 MT-ND1P03886 318 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ACSM4P0C7M7 580 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 IGHV1-8P0DP01 117 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 CD247P20963 164 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 MDH1P40925 334 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GYS2P54840 703 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GNG11P61952 73 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 UFM1P61960 85 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ACTA2P62736 377 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ACTG2P63267 376 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ACTC1P68032 377 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ACTA1P68133 377 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF92Q03936 586 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 TRAP1Q12931 704 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GPR50Q13585 617 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 PCLAFQ15004 111 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 PNLIPRP3Q17RR3 467 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GCNT6Q5T4J0 391 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 REEP3Q6NUK4 255 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 CEMP1Q6PRD7 247 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 SLC2A7Q6PXP3 512 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 TSEN54Q7Z6J9 526 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ANKRD13BQ86YJ7 626 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 MICU2Q8IYU8 434 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF676Q8N7Q3 588 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 SPATA4Q8NEY3 305 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 OR2AJ1Q8NGZ0 328 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 ANGPTL6Q8NI99 470 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 TRMT10AQ8TBZ6 339 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 IFT81Q8WYA0 676 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 MICU1Q9BPX6 476 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 PAPOLGQ9BWT3 736 aaKnown RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 FUT8Q9BYC5 575 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 YY1AP1Q9H869 796 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 C19orf73Q9NVV2 129 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 GLS2Q9UI32 602 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 A4GNTQ9UNA3 340 aa4.93□□□□□ -1.62
SDCBP-203ENST00000424270 COA3Q9Y2R0 106 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-203ENST00000424270 TEX13CA0A0J9YWL9 993 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 NPIPB13A6NJU9 1138 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 SMIM23A6NLE4 172 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 NPIPB4C9JG80 1138 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 SHOXO15266 292 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 TBX1O43435 398 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 XRCC3O43542 346 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 PTP4A3O75365 173 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 CNIH1O95406 144 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 FAM106CPP0CH98 169 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 LBPP18428 481 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 MNDAP41218 407 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 EDDM3BP56851 147 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 TAS2R41P59536 307 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 LSM6P62312 80 aaKnown RBP4.92□□□□□ -1.62
SDCBP-203ENST00000424270 PITPNAQ00169 270 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 CDK6Q00534 326 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 TNP2Q05952 138 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF273Q14593 569 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 RGNQ15493 299 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 MEP1BQ16820 701 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 GTDC1Q4AE62 458 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 GLYATL3Q5SZD4 288 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 AGBL2Q5U5Z8 902 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 LGALS9CQ6DKI2 356 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 LCN8Q6JVE9 175 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 TMEM65Q6PI78 240 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 LINC00114Q6XXX2 140 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 ZBTB49Q6ZSB9 765 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 THAP5Q7Z6K1 395 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 WDR86Q86TI4 376 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 HAPLN4Q86UW8 402 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 NAA40Q86UY6 237 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 C11orf53Q8IXP5 236 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 OR6V1Q8N148 313 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 STPG2Q8N412 459 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 OR11H6Q8NGC7 330 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 OR51A7Q8NH64 312 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms