RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 MKXQ8IYA7 352 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 C11orf42Q8N5U0 333 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 SDR9C7Q8NEX9 313 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 OR5K1Q8NHB7 308 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 FANK1Q8TC84 345 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 IFT27Q9BW83 186 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 NDUFAF4Q9P032 175 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 GMPR2Q9P2T1 348 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 RHBDD3Q9Y3P4 386 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 FAM32AQ9Y421 112 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 N6AMT1Q9Y5N5 214 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 hCG_38984A0A1B0GV85 526 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 A6NDX4 124 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 OR2AT4A6NND4 320 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 PEX14O75381 377 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 GLCEO94923 617 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 SERPINA1P01009 418 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 GMFBP60983 142 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC35A2P78381 396 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 IL5RAQ01344 420 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 ZNRF4Q8WWF5 429 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 SLAMF6Q96DU3 332 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 DHRS1Q96LJ7 313 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 MICU1Q9BPX6 476 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 NLKQ9UBE8 527 aa13.5□□□□□ -0.25
CHCHD3-202ENST00000423635 EPPK1P58107 5090 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 TVP23AA6NH52 213 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 TMEM210A6NLX4 147 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 AKR7A2O43488 359 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 GNALP38405 381 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 RAB13P51153 203 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 LGALS4P56470 323 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 TAF13Q15543 124 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 ZNRF1Q8ND25 227 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 CSNK2A3Q8NEV1 391 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 RPL3LQ92901 407 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 REEP6Q96HR9 211 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 ELL3Q9HB65 397 aaPredicted RBP13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 CD300AQ9UGN4 299 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 LRP12Q9Y561 859 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
CHCHD3-202ENST00000423635 IGKV1D-17A0A075B6S4 117 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 ANXA2P2A6NMY6 339 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 TBX1O43435 398 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 PF4V1P10720 104 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 PYCR1P32322 319 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 GSK3AP49840 483 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 COL10A1Q03692 680 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 LIPEQ05469 1076 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 SNCBQ16143 134 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 TEX30Q5JUR7 227 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 Q6ZS46 218 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 PRSS45Q7RTY3 260 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 FAM185AQ8N0U4 392 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 OR5AU1Q8NGC0 362 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 OR2T4Q8NH00 348 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 OR52J3Q8NH60 311 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 C7orf34Q96L11 122 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 OR5M11Q96RB7 305 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 RTL8AQ9BWD3 113 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 PAPOLGQ9BWT3 736 aaKnown RBP13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 SP140LQ9H930 580 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 INTS9Q9NV88 658 aaKnown RBP13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 ZNF222Q9UK12 451 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 PITPNC1Q9UKF7 332 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
CHCHD3-202ENST00000423635 A0A1W2PRX2 142 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 E9PQ18 207 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 GSTA4O15217 222 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 RHBDL1O75783 438 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 PSG2P11465 335 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 DCTDP32321 178 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC15A1P46059 708 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 GABRA2P47869 451 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 BLCAPP62952 87 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 GRB2P62993 217 aaKnown RBP13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC35F1Q5T1Q4 408 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 LYPD4Q6UWN0 246 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 CPLX4Q7Z7G2 160 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 LHFPL4Q7Z7J7 247 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 FTMTQ8N4E7 242 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 PROKR2Q8NFJ6 384 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 OR52H1Q8NGJ2 320 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 OR5P3Q8WZ94 311 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 SDSLQ96GA7 329 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 ATP6V1G3Q96LB4 118 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 ABCB9Q9NP78 766 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms