RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 APOL3O95236 402 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 CLIC3O95833 236 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 EGR1P18146 543 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 ADARB1P78563 741 aaKnown RBP12.63□□□□□ -0.39
USB1-202ENST00000423271 OR8B8Q15620 311 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 RBMS3Q6XE24 437 aaKnown RBP12.63□□□□□ -0.39
USB1-202ENST00000423271 SLC35F2Q8IXU6 374 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 GCSAMQ8N6F7 178 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 PLPP7Q8NBV4 271 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 RHOXF1Q8NHV9 184 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 RFKQ969G6 155 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 TECTBQ96PL2 329 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 TTTY10Q9BZA0 68 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 MS4A7Q9GZW8 240 aaPredicted RBP12.63□□□□□ -0.39
USB1-202ENST00000423271 SMURF1Q9HCE7 757 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
USB1-202ENST00000423271 hCG_1807616A0A1W2PRN6 198 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 PSMD9O00233 223 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
USB1-202ENST00000423271 ADAM20O43506 726 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 MPZL2O60487 215 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 FCN3O75636 299 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 PLATP00750 562 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 H2BFMP0C1H6 154 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 PPIAL4GP0DN37 164 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 DDOSTP39656 456 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 FGF12P61328 243 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 CSNK2BP67870 215 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 TMED1Q13445 227 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 MEDAGQ5VYS4 303 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 KRT77Q7Z794 578 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 DHRSXQ8N5I4 330 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 APOL4Q9BPW4 351 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 VCXQ9H320 206 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 C14orf119Q9NWQ9 140 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
USB1-202ENST00000423271 IGHV3OR15-7A0A075B7D8 119 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 MDFIC2A0A1B0GVS7 189 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 GYPAP02724 150 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 PRTN3P24158 256 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 CAPGP40121 348 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 MTNR1AP48039 350 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 GSK3AP49840 483 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 IL5RAQ01344 420 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 POU4F2Q12837 409 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 BAMBIQ13145 260 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 ZNF691Q5VV52 312 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 C9orf139Q6ZV77 190 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 RHOUQ7L0Q8 258 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 FAM90A1Q86YD7 464 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 C3orf56Q8N813 242 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 OR52H1Q8NGJ2 320 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 OR8S1Q8NH09 359 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 APH1BQ8WW43 257 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 RNFT2Q96EX2 444 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 PGAM5Q96HS1 289 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 MNTQ99583 582 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 TBX5Q99593 518 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 ADI1Q9BV57 179 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 CLN6Q9NWW5 311 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.61□□□□□ -0.39
USB1-202ENST00000423271 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 LRP12Q9Y561 859 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 CMYA5Q8N3K9 4069 aa12.61□□□□□ -0.39
USB1-202ENST00000423271 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 A0A1B0GW55 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 ZNF670-ZNF695F2Z2N8 137 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 MAGEB4O15481 346 aaPredicted RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 ENSAO43768 121 aaKnown RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 LHBP01229 141 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 APOC1P02654 83 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L3P0CJ86 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L4P0CJ87 422 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L5P0CJ88 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L6P0CJ89 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L7P0CJ90 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 ATP6V1E1P36543 226 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 CXCR4P61073 352 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 MZT1Q08AG7 82 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 RIPK1Q13546 671 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 KCNJ8Q15842 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 KCTD18Q6PI47 426 aaPredicted RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4L9Q6RFH8 374 aaPredicted RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 SSX6Q7RTT6 188 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 OR1M1Q8NGA1 313 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms