RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 BRD7Q9NPI1 651 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4Q9UBX2 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 AQP12BA6NM10 295 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GNGT2O14610 69 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GPR37O15354 613 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 EEF1B2P24534 225 aaKnown RBP13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GSK3AP49840 483 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 ZNF121P58317 390 aaPredicted RBP13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GMFBP60983 142 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 IL5RAQ01344 420 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GUCA2AQ02747 115 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 DNAL1Q4LDG9 190 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 SPATA24Q86W54 205 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 AQP12AQ8IXF9 295 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 LINC01006Q8NI28 216 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 TEX47Q8TBZ9 253 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 GIPC3Q8TF64 312 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 RNF133Q8WVZ7 376 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 FEVQ99581 238 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 RBM4BQ9BQ04 359 aaKnown RBP13.3□□□□□ -0.28
COL18A1-205ENST00000423214 ABHD6Q9BV23 337 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 DGCR6LQ9BY27 220 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 TCF7L1Q9HCS4 588 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
COL18A1-205ENST00000423214 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
COL18A1-205ENST00000423214 PAHP00439 452 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 H2BFMP0C1H6 154 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 ELF3P78545 371 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-205ENST00000423214 FLOT2Q14254 428 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 TAF9Q16594 264 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 METAP1DQ6UB28 335 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-205ENST00000423214 KCTD8Q6ZWB6 473 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 SHFQ7M4L6 423 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 C11orf53Q8IXP5 236 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 IQCF1Q8N6M8 205 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 NPRL2Q8WTW4 380 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 MED20Q9H944 212 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 ABCB9Q9NP78 766 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 CMC2Q9NRP2 79 aa13.29□□□□□ -0.28
COL18A1-205ENST00000423214 FAM183AA6NL82 134 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 H3BN98 237 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-205ENST00000423214 CDIPTO14735 213 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-205ENST00000423214 CLPXO76031 633 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 PAICSP22234 425 aaKnown RBP13.28□□□□□ -0.28
COL18A1-205ENST00000423214 GSTT1P30711 240 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 PROK1P58294 105 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 KRTAP10-3P60369 221 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 LINC01590Q5TEZ4 76 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 STUMQ69YW2 141 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 ASPHD2Q6ICH7 369 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 RHOUQ7L0Q8 258 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-205ENST00000423214 HS3ST5Q8IZT8 346 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 LY6G5BQ8NDX9 201 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 SGK3Q96BR1 496 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 ITPKCQ96DU7 683 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 SEH1LQ96EE3 360 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 DMRTB1Q96MA1 342 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 DNTTIP1Q9H147 329 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 TLNRD1Q9H1K6 362 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 RGCCQ9H4X1 137 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 POMPQ9Y244 141 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 RHBDD3Q9Y3P4 386 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 MPC1Q9Y5U8 109 aa13.28□□□□□ -0.28
COL18A1-205ENST00000423214 A0A1W2PQ09 198 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 A0A1W2PRD5 423 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 A0A1W2PRF3 423 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 A0A1W2PRM7 423 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 SLC22A31A6NKX4 558 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 TMEM210A6NLX4 147 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 NPFFO15130 113 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 GSC2O15499 205 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 GLCEO94923 617 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 SELLP14151 372 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 PRKACGP22612 351 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 POU1F1P28069 291 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 PRB3Q04118 309 aaPredicted RBP13.27□□□□□ -0.29
COL18A1-205ENST00000423214 PRDX4Q13162 271 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 KLRD1Q13241 179 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 KLHL12Q53G59 568 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 Q6ZSV7 163 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 GALNT4Q8N4A0 578 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 OR5T2Q8NGG2 359 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 OR10Z1Q8NGY1 313 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.29
COL18A1-205ENST00000423214 PPP1R3EQ9H7J1 279 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 SNTG1Q9NSN8 517 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF391Q9UJN7 358 aa13.27□□□□□ -0.29
COL18A1-205ENST00000423214 ANKRD61A6NGH8 418 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 RNASEK-C17orf49H0YIS7 233 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 FKBP6O75344 327 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 E2F6O75461 281 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms