RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 MBOAT4Q96T53 435 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TSNAXQ99598 290 aaKnown RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 hADV38S2A0JD32 116 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF705EA8MWA4 302 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TPT1P13693 172 aaKnown RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 PLPPR5Q32ZL2 321 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 RPEQ96AT9 228 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TSPAN32Q96QS1 320 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 C20orf141Q9NUB4 165 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 OBSL1O75147 1896 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TNFSF12O43508 249 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 NME2P1O60361 137 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 PPP3CBP16298 524 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 NME2P22392 152 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ZBTB25P24278 435 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SOWAHCQ53LP3 525 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF251Q9BRH9 671 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 CDCA4Q9BXL8 241 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 COMMD5Q9GZQ3 224 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 PRSS44E7EML9 344 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 C1QAP02745 245 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TUBG1P23258 451 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TNFSF8P32971 234 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 GDNFP39905 211 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 RPS27P42677 84 aaKnown RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ALDH3B1P43353 468 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 LAX1Q8IWV1 398 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 FAM58AQ8N1B3 248 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TAAR6Q96RI8 345 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 POFUT1Q9H488 388 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 CPNE5Q9HCH3 593 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SELENOPP49908 381 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 NPY4RP50391 375 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 CDK5R1Q15078 307 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 GIMAP1Q8WWP7 306 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 WNT2BQ93097 391 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 MOGAT1Q96PD6 335 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 OR8B4Q96RC9 309 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 CCL19Q99731 98 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 RHNO1Q9BSD3 238 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 K7EPK0 472 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 CELA2AP08217 269 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 DYRK1AQ13627 763 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ATG4DQ86TL0 474 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ARHGEF39Q8N4T4 335 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 FAM71E2Q8N5Q1 922 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 UQCC2Q9BRT2 126 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 C3orf80F5H4A9 247 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 MGMTP16455 207 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 BAXQ07812 192 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 PRDX4Q13162 271 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 PARP16Q8N5Y8 322 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ADPRHL1Q8NDY3 354 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 DAZAP1Q96EP5 407 aaKnown RBP9.54□□□□□ -0.88
PTCH1-206ENST00000421141 HYLS1Q96M11 299 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 PLCXD1Q9NUJ7 323 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 HIF1ANQ9NWT6 349 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 HS3ST3B1Q9Y662 390 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 A0A1B0GV50 99 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 A8MXE2 369 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF354AO60765 605 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-206ENST00000421141 GNB3P16520 340 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 TAF9Q16594 264 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 FAM74A1Q5RGS3 127 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 FAM214BQ7L5A3 538 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 SLC35E1Q96K37 410 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 CMTM3Q96MX0 182 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 NDUFB11Q9NX14 153 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 OR6C3Q9NZP0 311 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-206ENST00000421141 SLC22A13Q9Y226 551 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ARPC5O15511 151 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 FAM87AP0C7U9 286 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 SPICQ8N5J4 248 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 OR51H1Q8NH63 302 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 ARL11Q969Q4 196 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-206ENST00000421141 LIPGQ9Y5X9 500 aa9.54□□□□□ -0.88
PTCH1-206ENST00000421141 TMEM127O75204 238 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ACSM1Q08AH1 577 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 SYT6Q5T7P8 510 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CHST2Q9Y4C5 530 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CYTIPO60759 359 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 NGFRP08138 427 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 BRS3P32247 399 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 PCBP3P57721 371 aaKnown RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 DUS3LQ96G46 650 aaKnown RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 MPC1Q9Y5U8 109 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 A6NHS1 94 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 GPR37O15354 613 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 HIKESHIQ53FT3 197 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 OTPQ5XKR4 325 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms