RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TFPI2P48307 235 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 EIF5AP63241 154 aaKnown RBP12.93□□□□□ -0.34
CHRD-204ENST00000420973 ATPAF1Q5TC12 328 aaPredicted RBP12.93□□□□□ -0.34
CHRD-204ENST00000420973 FCRLAQ7L513 359 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 OR1J1Q8NGS3 322 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 CASTOR1Q8WTX7 329 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
CHRD-204ENST00000420973 SNX22Q96L94 193 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 DERL3Q96Q80 235 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
CHRD-204ENST00000420973 TWSG1Q9GZX9 223 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 FOXJ2Q9P0K8 574 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 SUSD2Q9UGT4 822 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 TNFSF18Q9UNG2 199 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 CLDN16Q9Y5I7 305 aa12.93□□□□□ -0.34
CHRD-204ENST00000420973 PTBP3O95758 552 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 SFTPBP07988 381 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 GTF2F2P13984 249 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 CBFBQ13951 182 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 WBP2NLQ6ICG8 309 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 SLC46A1Q96NT5 459 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 FBXO4Q9UKT5 387 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 GABARAPH6UMI1 98 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 CCKBRP32239 447 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 CDKN2AP42771 156 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 FOXK1P85037 733 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 RPL18Q07020 188 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 HNF4GQ14541 408 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 UBE2V2Q15819 145 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 TMEM108Q6UXF1 575 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 LPAR4Q99677 370 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 ALG12Q9BV10 488 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 KCNJ16Q9NPI9 418 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 SEMA5BQ9P283 1151 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 AMDHD2Q9Y303 409 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 GSTP1P09211 210 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 GIMD1P0DJR0 217 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 CD34P28906 385 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 PPICP45877 212 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 ZNF616Q08AN1 781 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 FUT7Q11130 342 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 PNLIPRP3Q17RR3 467 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 DCAF10Q5QP82 559 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 OR5AP2Q8NGF4 316 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 S100A16Q96FQ6 103 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 LMF2Q9BU23 707 aaKnown RBP12.92□□□□□ -0.34
CHRD-204ENST00000420973 WWTR1Q9GZV5 400 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 POLR1DQ9Y2S0 133 aa12.92□□□□□ -0.34
CHRD-204ENST00000420973 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 HGFACQ04756 655 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 HERPUD1Q15011 391 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 ABHD4Q8TB40 342 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
CHRD-204ENST00000420973 A0A087WUJ7 227 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 K7ESF4 209 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 MFNGO00587 321 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 SLC16A7O60669 478 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 MAS1P04201 325 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 HTR2CP28335 458 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 SLC35G3Q8N808 338 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 MFSD8Q8NHS3 518 aa12.91□□□□□ -0.34
CHRD-204ENST00000420973 PTRH2Q9Y3E5 179 aaKnown RBP12.91□□□□□ -0.34
CHRD-204ENST00000420973 ZNF354AO60765 605 aaPredicted RBP12.9□□□□□ -0.34
CHRD-204ENST00000420973 DFFBO76075 338 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 TSPAN15O95858 294 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 DDAH2O95865 285 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 PGA3P0DJD8 388 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 IL11P20809 199 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 RNLSQ5VYX0 342 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 LCN10Q6JVE6 187 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 COMMD2Q86X83 199 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 ZNF676Q8N7Q3 588 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 NUDT10Q8NFP7 164 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 IFI44Q8TCB0 444 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 DEFB126Q9BYW3 111 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 WDR76Q9H967 626 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
CHRD-204ENST00000420973 GPR173Q9NS66 373 aa12.9□□□□□ -0.34
CHRD-204ENST00000420973 MRPL22Q9NWU5 206 aaKnown RBP12.9□□□□□ -0.34
CHRD-204ENST00000420973 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms