RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 BLVRAP53004 296 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 ZNF404Q494X3 552 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 SPICQ8N5J4 248 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 ZNF511Q8NB15 262 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 HDHD2Q9H0R4 259 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 MMP27Q9H306 513 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 CACNG2Q9Y698 323 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 HAX1O00165 279 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 RAC2P15153 192 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 FABP5Q01469 135 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 KCNMB1Q16558 191 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 DCAF12L2Q5VW00 463 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 EGFL6Q8IUX8 553 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 OR2Z1Q8NG97 314 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 OR6Q1Q8NGQ2 317 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 MCFD2Q8NI22 146 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 APOBEC3DQ96AK3 386 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-203ENST00000415600 CMBLQ96DG6 245 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 JMJD8Q96S16 334 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 CDADC1Q9BWV3 514 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 GSTK1Q9Y2Q3 226 aa17.32■□□□□ 0.36
PTPRU-203ENST00000415600 SIRT4Q9Y6E7 314 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-203ENST00000415600 IGLV1-36A0A0B4J1U3 117 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 IFNL4K9M1U5 179 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 FOXH1O75593 365 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 SOX6P35712 828 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 BMXP51813 675 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 DCTN2Q13561 401 aaKnown RBP17.31■□□□□ 0.36
PTPRU-203ENST00000415600 TP53I3Q53FA7 332 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 HAVCR1Q96D42 359 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 KCTD7Q96MP8 289 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 PLGRKTQ9HBL7 147 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 IL19Q9UHD0 177 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 NPTNQ9Y639 398 aa17.31■□□□□ 0.36
PTPRU-203ENST00000415600 E9PI62 339 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 OPRL1P41146 370 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 TRAM1Q15629 374 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 ZNF829Q3KNS6 432 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-203ENST00000415600 C22orf42Q6IC83 251 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 NANPQ8TBE9 248 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 S100ZQ8WXG8 99 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 PELI1Q96FA3 418 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 INTS14Q96SY0 518 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 TMED9Q9BVK6 235 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 G6PC2Q9NQR9 355 aa17.3■□□□□ 0.36
PTPRU-203ENST00000415600 TVP23AA6NH52 213 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 GABRPO00591 440 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 OGG1O15527 345 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 IL1AP01583 271 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
PTPRU-203ENST00000415600 GBX2P52951 348 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-203ENST00000415600 SRSF2Q01130 221 aaKnown RBP17.29■□□□□ 0.36
PTPRU-203ENST00000415600 ECH1Q13011 328 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 ZNF684Q5T5D7 378 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 DMKNQ6E0U4 476 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-203ENST00000415600 TTTY10Q9BZA0 68 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 WDR76Q9H967 626 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 TMEM106BQ9NUM4 274 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 PPP1R3CQ9UQK1 317 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 STARD10Q9Y365 291 aa17.29■□□□□ 0.36
PTPRU-203ENST00000415600 PHYHO14832 338 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 RER1O15258 196 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 RGS9O75916 674 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-203ENST00000415600 CD1AP06126 327 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 SELEP16581 610 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 CCDC58Q4VC31 144 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 PLEKHG7Q6ZR37 379 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 KCTD20Q7Z5Y7 419 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-203ENST00000415600 OR6N2Q8NGY6 317 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 OR2AJ1Q8NGZ0 328 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 OR13G1Q8NGZ3 307 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 AKIP1Q9NQ31 210 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 TMEM14AQ9Y6G1 99 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 WNK2Q9Y3S1 2297 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 EPHA1P21709 976 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 TMEM155Q4W5P6 130 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 CCDC92Q53HC0 331 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-203ENST00000415600 TMEM255AQ5JRV8 349 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 FBXW12Q6X9E4 464 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 C1QL2Q7Z5L3 287 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 MUC20Q8N307 709 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-203ENST00000415600 HAVCR2Q8TDQ0 301 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 BORCS5Q969J3 196 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 PGLYRP3Q96LB9 341 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 HMG20AQ9NP66 347 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 GNG8Q9UK08 70 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 KLHDC2Q9Y2U9 406 aa17.28■□□□□ 0.36
PTPRU-203ENST00000415600 A0A075B6Q4 140 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 PPIAL4EA0A075B759 164 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 PPIAL4CA0A0B4J2A2 164 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 PPIAL4DF5H284 164 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 MAGEB4O15481 346 aaPredicted RBP17.27■□□□□ 0.35
PTPRU-203ENST00000415600 CDRT1O95170 752 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 HLA-DQA2P01906 255 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 PPIAL4FP0DN26 164 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 ALOX5APP20292 161 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 CPT2P23786 658 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 TGM4P49221 684 aa17.27■□□□□ 0.35
PTPRU-203ENST00000415600 SRP9P49458 86 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms