RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 GFI1Q99684 422 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 DHRS9Q9BPW9 319 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 PAPOLGQ9BWT3 736 aaKnown RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 MRPL37Q9BZE1 423 aaKnown RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 NEK6Q9HC98 313 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 FZR1Q9UM11 496 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 NOP16Q9Y3C1 178 aaKnown RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 A0A0G2JK05 382 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 A0A1W2PPW3 197 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 ZNF850A8MQ14 1090 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CLEC2LP0C7M8 214 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 MMP15P51511 669 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 PRDX4Q13162 271 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CNN3Q15417 329 aaKnown RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 OR5A2Q8NGI9 324 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 GPR173Q9NS66 373 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CYSLTR2Q9NS75 346 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 TMEM100Q9NV29 134 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 DUSP13Q9UII6 198 aa12.17□□□□□ -0.46
SF3B1-204ENST00000414963 AK6Q9Y3D8 172 aaKnown RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 SPTAN1Q13813 2472 aaKnown RBP12.17□□□□□ -0.46
SF3B1-204ENST00000414963 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 NOTOA8MTQ0 251 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 MAS1P04201 325 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 CA6P23280 308 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 RORCP51449 518 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 FUT6P51993 359 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 MXD1Q05195 221 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 C1orf100Q5SVJ3 147 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 GLT8D1Q68CQ7 371 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 Q6ZR03 302 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 MOB3CQ70IA8 216 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 SPERTQ8NA61 448 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 BHLHE23Q8NDY6 225 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 OR52N4Q8NGI2 321 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 ITPKCQ96DU7 683 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 HIST1H2AAQ96QV6 131 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 SYT3Q9BQG1 590 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 BARHL1Q9BZE3 327 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 TPK1Q9H3S4 243 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 PLK3Q9H4B4 646 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 CCDC59Q9P031 241 aaKnown RBP12.16□□□□□ -0.46
SF3B1-204ENST00000414963 MYEF2Q9P2K5 600 aaKnown RBP12.16□□□□□ -0.46
SF3B1-204ENST00000414963 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 SLC7A11Q9UPY5 501 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 V9GY05 133 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
SF3B1-204ENST00000414963 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 OR5B21A6NL26 309 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 ANXA2P2A6NMY6 339 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 IFITM5A6NNB3 132 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 B9A039 149 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 MAGEB3O15480 346 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 ADH4P08319 380 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 AZGP1P25311 298 aaKnown RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 OR10A3P58181 314 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 MST1LQ2TV78 715 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 FAM76BQ5HYJ3 339 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 FAM166AQ6J272 317 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 CRIP3Q6Q6R5 217 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 HPSE2Q8WWQ2 592 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 TAAR3PQ9P1P4 343 aa12.15□□□□□ -0.46
SF3B1-204ENST00000414963 PLEKHB1Q9UF11 243 aaPredicted RBP12.15□□□□□ -0.46
SF3B1-204ENST00000414963 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 AIPO00170 330 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 SLC17A2O00624 439 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 HS3ST1O14792 307 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 MLNRO43193 412 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 SOX6P35712 828 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 RANBP1P43487 201 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 RBP2P50120 134 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 CAV3P56539 151 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 HNRNPA0Q13151 305 aaKnown RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 DYNC1I2Q13409 638 aaKnown RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 RIN1Q13671 783 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 KISS1Q15726 138 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 DGUOKQ16854 277 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 SWI5Q1ZZU3 235 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 DDI2Q5TDH0 399 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms