RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GEMIN6Q8WXD5 167 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 SGK3Q96BR1 496 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 DNAJC1Q96KC8 554 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 WFIKKN1Q96NZ8 548 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR52B2Q96RD2 323 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 GABARAPL3Q9BY60 117 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 IL22Q9GZX6 179 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 MFSD1Q9H3U5 465 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPP21Q9H633 154 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 NTN4Q9HB63 628 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 RBM22Q9NW64 420 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 NKIRAS1Q9NYS0 192 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 UXTQ9UBK9 157 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 MARCOQ9UEW3 520 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD84Q9UIB8 345 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 FBXO5Q9UKT4 447 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ARL5AQ9Y689 179 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 USH1CQ9Y6N9 552 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 COL27A1Q8IZC6 1860 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM131Q92545 1883 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 GTF3C1Q12789 2109 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 KIAA0100Q14667 2235 aaKnown RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCDC88CQ9P219 2028 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TRAV39A0A0B4J263 110 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 A0A0B4J2A0 478 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TSPAN11A1L157 253 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 HEATR9A2RTY3 570 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 HIDE1A8MVS5 230 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM114B3SHH9 223 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 F5H5T6 163 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 H0YHG0 523 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 K7ERQ8 282 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 FXYD1O00168 92 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 KDELR3O43731 214 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 DCTN3O75935 186 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 VAPBO95292 243 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ATP6V1G2O95670 118 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 C6orf47O95873 294 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RHOCP08134 193 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPS17P08708 135 aaKnown RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 PIRTP0C851 137 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLC2A3P11169 496 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD70P32970 193 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RORAP35398 523 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 PMELP40967 661 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD151P48509 253 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 NCBP2P52298 156 aaKnown RBP eCLIP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 STC1P52823 247 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 C1QTNF8P60827 252 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RAB10P61026 200 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPL23AP62750 156 aaKnown RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLC7A9P82251 487 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF92Q03936 586 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 GK3PQ14409 553 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR4D1Q15615 310 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ACSBG2Q5FVE4 666 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TCEAL5Q5H9L2 206 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 PPM1LQ5SGD2 360 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 VAX1Q5SQQ9 334 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 HHATQ5VTY9 493 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM215Q68D42 235 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 C19orf35Q6ZS72 473 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCDC121Q6ZUS5 278 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 LINC00173Q6ZV60 143 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPS27LQ71UM5 84 aaKnown RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 LINC00523Q86TU6 105 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 SETD3Q86TU7 594 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 EGFL6Q8IUX8 553 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 BBS7Q8IWZ6 715 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 STPG2Q8N412 459 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 OTUD6BQ8N6M0 293 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CYB561D1Q8N8Q1 229 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR4F6Q8NGB9 312 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR8J1Q8NGP2 316 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 UBALD1Q8TB05 177 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD200R1Q8TD46 325 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 NAT14Q8WUY8 206 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 PIH1D2Q8WWB5 315 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 PEX13Q92968 403 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF707Q96C28 371 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ECHDC3Q96DC8 303 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TCEAL4Q96EI5 215 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 L3HYPDHQ96EM0 354 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 BIRC8Q96P09 236 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZBTB18Q99592 522 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 RARRES2Q99969 163 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCDC77Q9BR77 488 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM59Q9BXS4 323 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 DRC3Q9H069 523 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 C11orf49Q9H6J7 331 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 NOX3Q9HBY0 568 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 SAR1AQ9NR31 198 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 C20orf96Q9NUD7 363 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 NLE1Q9NVX2 485 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 SHPKQ9UHJ6 478 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCL26Q9Y258 94 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 CPAMD8Q8IZJ3 1885 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms