RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PRDX4Q13162 271 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 DCTN2Q13561 401 aaKnown RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 RIN1Q13671 783 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CDSNQ15517 529 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 KISS1Q15726 138 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 ZNF79Q15937 498 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 IGFBP7Q16270 282 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 C4orf17Q53FE4 359 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 DMRTC1Q5HYR2 192 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 TMEM255AQ5JRV8 349 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 PLCXD3Q63HM9 321 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 MTFR2Q6P444 385 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 FAM131AQ6UXB0 335 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 UNQ6126/PRO20091Q6UXV3 157 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 WFDC8Q8IUA0 241 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 C1orf174Q8IYL3 243 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 BHLHE23Q8NDY6 225 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 OR4M1Q8NGD0 313 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 OR51D1Q8NGF3 324 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 LILRB4Q8NHJ6 448 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 PRR7Q8TB68 274 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 HPSE2Q8WWQ2 592 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 PIGCQ92535 297 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 RNASE6Q93091 150 aaKnown RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 FAM3DQ96BQ1 224 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CPNE2Q96FN4 548 aaPredicted RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 MARS2Q96GW9 593 aaKnown RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 DIRAS2Q96HU8 199 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 BBC3Q96PG8 261 aaPredicted RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 PAPOLGQ9BWT3 736 aaKnown RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 PPP1R3EQ9H7J1 279 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 TUBG2Q9NRH3 451 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CYSLTR2Q9NS75 346 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 EXTL2Q9UBQ6 330 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 ERRFI1Q9UJM3 462 aaPredicted RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 MRPS28Q9Y2Q9 187 aaKnown RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 CFAP46Q8IYW2 2715 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 IGKV1-27A0A075B6S5 117 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 TMEM272A0A1B0GTI8 110 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 FAM230AA0A1W2PPH8 454 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ANKRD30BLA7E2S9 258 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 IQCF6A8MYZ5 107 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ATP6V1G2-DDX39BF2Z307 99 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 LILRA1O75019 489 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 BPNT1O95861 308 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 CRYAAP02489 173 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 RAC2P15153 192 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SELEP16581 610 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 PTAFRP25105 342 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 CD40P25942 277 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 PTBP1P26599 531 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-204ENST00000413141 TALDO1P37837 337 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 EVX1P49640 407 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 EFNB2P52799 333 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 PPP5CP53041 499 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ZP1P60852 638 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 NKX6-1P78426 367 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 SORDQ00796 357 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SNTB2Q13425 540 aaKnown RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 UNC119Q13432 240 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 MADCAM1Q13477 382 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 IL18Q14116 193 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 CEACAM21Q3KPI0 293 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 MBNL2Q5VZF2 373 aaKnown RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 AWAT2Q6E213 333 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 OR2T2Q6IF00 324 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 METAP1DQ6UB28 335 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 GLIPR1L1Q6UWM5 242 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 TMEM108Q6UXF1 575 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 LHFPL2Q6ZUX7 228 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 MOB3CQ70IA8 216 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ZDHHC23Q8IYP9 409 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 PNLDC1Q8NA58 520 aaKnown RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 OR5D18Q8NGL1 313 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SYNPRQ8TBG9 265 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 KLF14Q8TD94 323 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 CA5BP1Q8WTZ4 195 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 TNFAIP8L1Q8WVP5 186 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 RAB40AQ8WXH6 277 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 DVL3Q92997 716 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 PTX4Q96A99 478 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 RFT1Q96AA3 541 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 HAVCR1Q96D42 359 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 CMBLQ96DG6 245 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ITPKCQ96DU7 683 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 BORCS8Q96FH0 119 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 LRRC46Q96FV0 321 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 ZC3HAV1LQ96H79 300 aaKnown RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 C1orf147Q96MC9 270 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 GPER1Q99527 375 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SDHCQ99643 169 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 SOSTQ9BQB4 213 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SRRQ9GZT4 340 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 FGF23Q9GZV9 251 aaPredicted RBP5.7□□□□□ -1.5
VPS41-204ENST00000413141 ABCG5Q9H222 651 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 NEK6Q9HC98 313 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 PALMDQ9NP74 551 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 RHBDL2Q9NX52 303 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 MRPL15Q9P015 296 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms