RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 VN1R3Q9BXE9 311 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 NXF5Q9H1B4 397 aaKnown RBP12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 IGKV1-8A0A0C4DH67 115 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 SERPINE3A8MV23 424 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 NGFRP08138 427 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 ST6GAL1P15907 406 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 FOXO1Q12778 655 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 CST9LP1Q5W188 147 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 PITPNC1Q9UKF7 332 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 XKRY2A2RUG3 117 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 CDRT15L2A8MXV6 281 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 GREM1O60565 184 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 HLA-HP01893 362 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 TK1P04183 234 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 CCR2P41597 374 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 RUNX3Q13761 415 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 GAMTQ14353 236 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 CATSPERDQ86XM0 798 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 OTOFQ9HC10 1997 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CD300LBA8K4G0 201 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 EIF4E2O60573 245 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CD200P41217 278 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 DCAF7P61962 342 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 GPM6BQ13491 265 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 TESK1Q15569 626 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 PRSS41Q7RTY9 318 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 MCHR2Q969V1 340 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 SMIM7Q9BQ49 75 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 SMDT1Q9H4I9 107 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 NXPH3O95157 252 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 TRGC2P03986 189 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CEACAM5P06731 702 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 OPRM1P35372 400 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 EFNA3P52797 238 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF787Q6DD87 383 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC2A4RGQ9NR83 387 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 INSL6Q9Y581 213 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 F8VVB4 439 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 F8VWA3 439 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 TBX6O95947 436 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CTLA4P16410 223 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 HOXA5P20719 270 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CNN3Q15417 329 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 PCK2Q16822 640 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 LINC01590Q5TEZ4 76 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 GRINAQ7Z429 371 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 M1APQ8TC57 530 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 TMED3Q9Y3Q3 217 aa12.4□□□□□ -0.42
CLTCL1-201ENST00000412649 CTSVO60911 334 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 MOSPD3O75425 235 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 CNOT4O95628 575 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 IL2RAP01589 272 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 MELTFP08582 738 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 VSIG8P0DPA2 414 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 CD1CP29017 333 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 DEFB103AP81534 67 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 IL13RA2Q14627 380 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 CLEC12BQ2HXU8 276 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 WDR5BQ86VZ2 330 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PTGES2Q9H7Z7 377 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 C4orf51C9J302 202 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 HKR1P10072 659 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 CSNK1A1P48729 337 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PSG6Q00889 435 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 FIP1L1Q6UN15 594 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 NPSR1Q6W5P4 371 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 OR2A5Q96R48 311 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 MAGT1Q9H0U3 335 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PLEK2Q9NYT0 353 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 METTL15P1P0C7V9 234 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 OR10C1Q96KK4 312 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 GPR132Q9UNW8 380 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 SOCS1O15524 211 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 RPS4Y1P22090 263 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 FCARP24071 287 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 P2RY1P47900 373 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PSMB3P49720 205 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 SLC37A1P57057 533 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 OR8G1Q15617 311 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 PRTGQ2VWP7 1150 aa12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
CLTCL1-201ENST00000412649 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms