RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DIMT1Q9UNQ2 313 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 V9GYS6 101 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 A0A1B0GVI7 797 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 SYT7O43581 403 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 FSTL3O95633 263 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 GRPP07492 148 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 HTR1AP08908 422 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 UBCP0CG48 685 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 CCR9P51686 369 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 NANOS3P60323 173 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 MRPL28Q13084 256 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 ZMYND11Q15326 602 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 CCDC54Q8NEL0 328 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 OR1M1Q8NGA1 313 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 OR14K1Q8NGZ2 314 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 GGHQ92820 318 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 HIST1H2AAQ96QV6 131 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 GAL3ST1Q99999 423 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 RTL8AQ9BWD3 113 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 PLCXD1Q9NUJ7 323 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 NF1P21359 2839 aa16.69■□□□□ 0.26
PDLIM2-207ENST00000409417 ZFHX3Q15911 3703 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 ABCA2Q9BZC7 2435 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 EFCAB10A6NFE3 127 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 PIPP12273 146 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 MDH2P40926 338 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 HSPA13P48723 471 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 ETV1P50549 477 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM155Q4W5P6 130 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 FAM76BQ5HYJ3 339 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 IZUMO2Q6UXV1 221 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 WDR86Q86TI4 376 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 LINC01356Q8N9X3 169 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 HAVCR2Q8TDQ0 301 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM80Q96HE8 168 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF665Q9H7R5 613 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 C1orf123Q9NWV4 160 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 CNOT2Q9NZN8 540 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 RNF7Q9UBF6 113 aa16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 EXOSC1Q9Y3B2 195 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-207ENST00000409417 A6NLC8 198 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 XPNPEP2O43895 674 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 IGHV2-5P01817 119 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 MYL12AP19105 171 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 CDH15P55291 814 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ST3GAL4Q11206 333 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF154Q13106 437 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 CEACAM21Q3KPI0 293 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 CLVS2Q5SYC1 327 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM244Q5VVB8 128 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM42Q69YG0 159 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 C11orf53Q8IXP5 236 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 RDH10Q8IZV5 341 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 MUC20Q8N307 709 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 SPICQ8N5J4 248 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 BPIFB6Q8NFQ5 453 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 HPSE2Q8WWQ2 592 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 RAB39BQ96DA2 213 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 RNF170Q96K19 258 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TLNRD1Q9H1K6 362 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 PSORS1C1Q9UIG5 152 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 CAB39Q9Y376 341 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 RRP15Q9Y3B9 282 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 MALRD1Q5VYJ5 2156 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 LOC107986453A0A1B0GWG9 222 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM210A6NLX4 147 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 OR4C45A6NMZ5 311 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 B4DSR2 109 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 NRASP01111 189 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ISG15P05161 165 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 THBS2P35442 1172 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 GBX2P52951 348 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 CSNK2BP67870 215 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ALKBH1Q13686 389 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TMPRSS11AQ6ZMR5 421 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF826PQ6ZT77 177 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 KLHL36Q8N4N3 616 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 ANKRD60Q9BZ19 345 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 FGF23Q9GZV9 251 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 TMEM165Q9HC07 324 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 YAE1D1Q9NRH1 226 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 UBAP1Q9NZ09 502 aa16.67■□□□□ 0.26
PDLIM2-207ENST00000409417 PPIAL4EA0A075B759 164 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 A8MV72 311 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 PPIAL4DF5H284 164 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF205O95201 554 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 TGFAP01135 160 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 PPIAL4FP0DN26 164 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF12P17014 697 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 ZNF16P17020 682 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 MYF6P23409 242 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 TGM4P49221 684 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 GPM6AP51674 278 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 GNG3P63215 75 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 MED21Q13503 144 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 CEP78Q5JTW2 689 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 FAM201AQ5SY85 155 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 C6orf141Q5SZD1 244 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 FAM166AQ6J272 317 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 OR5A2Q8NGI9 324 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms