RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PRSS50Q9UI38 385 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 TP53TG5Q9Y2B4 290 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 SCN8AQ9UQD0 1980 aa8□□□□□ -1.13
LIG4-202ENST00000405925 MEIKINA0A087WXM9 373 aa8□□□□□ -1.13
LIG4-202ENST00000405925 IGLV1-36A0A0B4J1U3 117 aa8□□□□□ -1.13
LIG4-202ENST00000405925 PEX14O75381 377 aa8□□□□□ -1.13
LIG4-202ENST00000405925 PTHLHP12272 177 aa8□□□□□ -1.13
LIG4-202ENST00000405925 GALP22466 123 aa8□□□□□ -1.13
LIG4-202ENST00000405925 NFYBP25208 207 aa8□□□□□ -1.13
LIG4-202ENST00000405925 C12orf45Q8N5I9 185 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 PPP1R14BQ96C90 147 aa8□□□□□ -1.13
LIG4-202ENST00000405925 CMBLQ96DG6 245 aa8□□□□□ -1.13
LIG4-202ENST00000405925 PTDSS2Q9BVG9 487 aa8□□□□□ -1.13
LIG4-202ENST00000405925 ARL6Q9H0F7 186 aa8□□□□□ -1.13
LIG4-202ENST00000405925 CD300LBA8K4G0 201 aa8□□□□□ -1.13
LIG4-202ENST00000405925 F5H0A9 414 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 SDCBPO00560 298 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 TCRBP04435 133 aa8□□□□□ -1.13
LIG4-202ENST00000405925 NPY4RP50391 375 aa8□□□□□ -1.13
LIG4-202ENST00000405925 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 ZNF385CQ66K41 422 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 MDP1Q86V88 176 aa8□□□□□ -1.13
LIG4-202ENST00000405925 C1orf87Q8N0U7 546 aa8□□□□□ -1.13
LIG4-202ENST00000405925 OSR2Q8N2R0 312 aa8□□□□□ -1.13
LIG4-202ENST00000405925 OR51S1Q8NGJ8 323 aa8□□□□□ -1.13
LIG4-202ENST00000405925 OR13G1Q8NGZ3 307 aa8□□□□□ -1.13
LIG4-202ENST00000405925 ZFAND1Q8TCF1 268 aa8□□□□□ -1.13
LIG4-202ENST00000405925 GIMAP1Q8WWP7 306 aa8□□□□□ -1.13
LIG4-202ENST00000405925 TIMD4Q96H15 378 aa8□□□□□ -1.13
LIG4-202ENST00000405925 CITED4Q96RK1 184 aa8□□□□□ -1.13
LIG4-202ENST00000405925 ZNF426Q9BUY5 554 aa8□□□□□ -1.13
LIG4-202ENST00000405925 AUNIPQ9H7T9 357 aa8□□□□□ -1.13
LIG4-202ENST00000405925 GHRLQ9UBU3 117 aa8□□□□□ -1.13
LIG4-202ENST00000405925 SIRT4Q9Y6E7 314 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 A0A1W2PNV4 684 aa8□□□□□ -1.13
LIG4-202ENST00000405925 HMX3A6NHT5 357 aa8□□□□□ -1.13
LIG4-202ENST00000405925 SH2D1BO14796 132 aa8□□□□□ -1.13
LIG4-202ENST00000405925 KLF4O43474 513 aa8□□□□□ -1.13
LIG4-202ENST00000405925 IGF2P01344 180 aa8□□□□□ -1.13
LIG4-202ENST00000405925 NKX2-5P52952 324 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 NANOS3P60323 173 aaKnown RBP8□□□□□ -1.13
LIG4-202ENST00000405925 C19orf57Q0VDD7 668 aa8□□□□□ -1.13
LIG4-202ENST00000405925 SRSF6Q13247 344 aaKnown RBP8□□□□□ -1.13
LIG4-202ENST00000405925 EIF5AL1Q6IS14 154 aaKnown RBP8□□□□□ -1.13
LIG4-202ENST00000405925 TFAP2EQ6VUC0 442 aa8□□□□□ -1.13
LIG4-202ENST00000405925 NUFIP2Q7Z417 695 aaKnown RBP8□□□□□ -1.13
LIG4-202ENST00000405925 SLAMF9Q96A28 289 aa8□□□□□ -1.13
LIG4-202ENST00000405925 ELMOD3Q96FG2 381 aa8□□□□□ -1.13
LIG4-202ENST00000405925 OPN3Q9H1Y3 402 aaPredicted RBP8□□□□□ -1.13
LIG4-202ENST00000405925 DEPPQ9NTK1 212 aa8□□□□□ -1.13
LIG4-202ENST00000405925 KIR2DS1A0A191URI9 304 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 C16orf97H3BN30 126 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 GLI4P10075 376 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 KIR2DS4P43632 304 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 RAB2AP61019 212 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 RPS4XP62701 263 aaKnown RBP7.99□□□□□ -1.13
LIG4-202ENST00000405925 KIR2DS1Q14954 304 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 AADACL3Q5VUY0 350 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 RNLSQ5VYX0 342 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 FAAP20Q6NZ36 180 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CELF2-AS1Q8N7Q2 184 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CHPT1Q8WUD6 406 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SPIN2AQ99865 258 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SPIN2BQ9BPZ2 258 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SCPEP1Q9HB40 452 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CACNA1DQ01668 2161 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 A0A0A6YYH2 397 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 A6NJ64 397 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 ZSCAN5BA6NJL1 495 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SPINT2O43291 252 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 PTGFRP43088 359 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 DLX5P56178 289 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 KLF3P57682 345 aaPredicted RBP7.99□□□□□ -1.13
LIG4-202ENST00000405925 ERVK-16P61578 105 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 AGAP6Q5VW22 663 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SLC25A47Q6Q0C1 308 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CATSPERDQ86XM0 798 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SPACA3Q8IXA5 215 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 OR8H3Q8N146 312 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 PRSS33Q8NF86 280 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 ZNF519Q8TB69 540 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 MS4A3Q96HJ5 214 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 MRPL22Q9NWU5 206 aaKnown RBP7.99□□□□□ -1.13
LIG4-202ENST00000405925 LSM5Q9Y4Y9 91 aaKnown RBP7.99□□□□□ -1.13
LIG4-202ENST00000405925 DENND4CQ5VZ89 1909 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 H7C1Q1 480 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 M0R233 179 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CDC14BO60729 498 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 ATG12O94817 140 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SUCLG1P53597 346 aaKnown RBP7.99□□□□□ -1.13
LIG4-202ENST00000405925 PSG4Q00888 419 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 GGTLC2Q14390 218 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 PLGLAQ15195 96 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 PHLDA2Q53GA4 152 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 SKA3Q8IX90 412 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 C20orf196Q8IYI0 205 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 FADS6Q8N9I5 356 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms