RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 F5H5P2 479 aa28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 OVOL3O00110 214 aa28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 RGS9O75916 674 aaPredicted RBP28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 UBE2V2Q15819 145 aa28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 UNQ9370/PRO34162Q6UXP9 181 aa28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 ITPKCQ96DU7 683 aa28.29■■■□□ 2.12
CSNK1E-204ENST00000403904 ALDH3B2P48448 385 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 FAM27D1Q5T7N8 215 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 PLCXD3Q63HM9 321 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 ASPHD2Q6ICH7 369 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 OR8S1Q8NH09 359 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 NOX4Q9NPH5 578 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 TRBV5-7A0A0A0MS05 114 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 ANXA2P2A6NMY6 339 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 GABRPO00591 440 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 RAF1P04049 648 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 CCL8P80075 99 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 OR5D14Q8NGL3 314 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 OR13F1Q8NGS4 319 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 TAS2R4Q9NYW5 299 aa28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 NOP16Q9Y3C1 178 aaKnown RBP28.28■■■□□ 2.12
CSNK1E-204ENST00000403904 H7C417 338 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 PIN1P1O15428 100 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 ADH4P08319 380 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 MAPK3P27361 379 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 CD200R1LQ6Q8B3 271 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 OR13C9Q8NGT0 318 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 HPSE2Q8WWQ2 592 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 OR5P3Q8WZ94 311 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 YIPF6Q96EC8 236 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 SORCS2Q96PQ0 1159 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 DIRC2Q96SL1 478 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 PPIL3Q9H2H8 161 aaKnown RBP28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 ZCCHC4Q9H5U6 513 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 CXorf56Q9H5V9 222 aa28.27■■■□□ 2.12
CSNK1E-204ENST00000403904 IGHV3-64DA0A0J9YX35 117 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 GATBO75879 557 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 CRYBB2P43320 205 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 SPRNQ5BIV9 151 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 UTS2BQ765I0 119 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 NPRL2Q8WTW4 380 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 THRSPQ92748 146 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 TRMT61AQ96FX7 289 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 HIST1H2AAQ96QV6 131 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 FGF23Q9GZV9 251 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 RAB1BQ9H0U4 201 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 OR51E2Q9H255 320 aa28.26■■■□□ 2.11
CSNK1E-204ENST00000403904 TNFSF4P23510 183 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 GADD45AP24522 165 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 TNFAIP6P98066 277 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 CEACAM21Q3KPI0 293 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 LURAP1Q96LR2 239 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 OR2V2Q96R30 315 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 STUB1Q9UNE7 303 aa28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 FLNBO75369 2602 aaKnown RBP28.25■■■□□ 2.11
CSNK1E-204ENST00000403904 IGKV1-9A0A0C4DH69 117 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 TPD52L2O43399 206 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 RPL5P46777 297 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 MAB21L1Q13394 359 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 PCGF3Q3KNV8 242 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 RNF170Q96K19 258 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 ABCB9Q9NP78 766 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 EXOSC4Q9NPD3 245 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 CHD3Q12873 2000 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 TRDV1A0A1B0GX56 115 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 NDUFS7O75251 213 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 GPX5O75715 221 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 NCR1O76036 304 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 THBS2P35442 1172 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 FAM209AQ5JX71 171 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 SPERTQ8NA61 448 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 TRMT10AQ8TBZ6 339 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 MICU1Q9BPX6 476 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 CXXC4Q9H2H0 198 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 DECR2Q9NUI1 292 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 NKIRAS2Q9NYR9 191 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 IL19Q9UHD0 177 aa28.24■■■□□ 2.11
CSNK1E-204ENST00000403904 ANKRD17O75179 2603 aaKnown RBP28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 TRAV8-7A0A075B6U6 113 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 LOC100289279A0A1B0GTE1 492 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 CD55P08174 381 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 ATF1P18846 271 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 GPM6AP51674 278 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 OR51A2Q8NGJ7 313 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 ITLN1Q8WWA0 313 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 CHCHD6Q9BRQ6 235 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 RTL8AQ9BWD3 113 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 EDARQ9UNE0 448 aa28.23■■■□□ 2.11
CSNK1E-204ENST00000403904 SULT1B1O43704 296 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 UCHL1P09936 223 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 ZNF529Q6P280 563 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 GPR141Q7Z602 305 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 OR1M1Q8NGA1 313 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 OR5A2Q8NGI9 324 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 MEGF10Q96KG7 1140 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 CKLFQ9UBR5 152 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 SLC7A11Q9UPY5 501 aa28.22■■■□□ 2.11
CSNK1E-204ENST00000403904 HPXP02790 462 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 ERCC1P07992 297 aaPredicted RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms