RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ERICH5Q6P6B1 374 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF880Q6PDB4 577 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 COMTD1Q86VU5 262 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 UBALD2Q8IYN6 164 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 C19orf18Q8NEA5 215 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR4D6Q8NGJ1 314 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR10G6Q8NH81 332 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 CACNG8Q8WXS5 425 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 RCN3Q96D15 328 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 RNF170Q96K19 258 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR10C1Q96KK4 312 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR4K3Q96R72 315 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 NAPGQ99747 312 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 LZTS2Q9BRK4 669 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 MAP1LC3CQ9BXW4 147 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 ARMC7Q9H6L4 198 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 SPACA1Q9HBV2 294 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 CSNK1G1Q9HCP0 422 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF229Q9UJW7 825 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 CES1P1Q9UKY3 287 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR51B2Q9Y5P1 312 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 SLIT3O75094 1523 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 AQRO60306 1485 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 TSPOAP1O95153 1857 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 DOCK8Q8NF50 2099 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 A0A0A6YYD5 115 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGHV3-72A0A0B4J1Y9 119 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 GOLGA8QA0A0J9YX86 632 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 E7EWF7 191 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 M0R1X1 148 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 TNFRSF11BO00300 401 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 SMC2O95347 1197 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 WISP3O95389 354 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 PLEKHA8P1O95397 391 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 LCA5LO95447 670 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 GCGP01275 180 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 TRBV12-3P01733 135 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 C1GALT1C1LP0DN25 315 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 IVDP26440 423 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 HTR2CP28335 458 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 CMC4P56277 68 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR2B8PP59922 312 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 ATP6V1FQ16864 119 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 C18orf21Q32NC0 220 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 C5orf47Q569G3 176 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 CD300LGQ6UXG3 332 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 TMPRSS11AQ6ZMR5 421 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 SHISA6Q6ZSJ9 500 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 NDUFAF7Q7L592 441 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 NECAP1Q8NC96 275 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR5T1Q8NG75 326 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR6K6Q8NGW6 343 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 CPNE4Q96A23 557 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 CCDC124Q96CT7 223 aaKnown RBP2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 FAM19A4Q96LR4 140 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 NUDT9Q9BW91 350 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 ARV1Q9H2C2 271 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 ANKHQ9HCJ1 492 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 VCX3AQ9NNX9 186 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 HES2Q9Y543 173 aa2.26□□□□□ -2.05
HMGB1P17-201ENST00000403495 TMEM150BA6NC51 233 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 IQCF5A8MTL0 148 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 DFFAO00273 331 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 YEATS4O95619 227 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGHV3-11P01762 117 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 HTR1DP28221 377 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 TGFBR1P36897 503 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 PPIDQ08752 370 aaKnown RBP2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 PIGHQ14442 188 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 SLC25A35Q3KQZ1 300 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 HSP90B2PQ58FF3 399 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 PDPK2PQ6A1A2 396 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 EPGNQ6UW88 154 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 COPS6Q7L5N1 327 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 MDP1Q86V88 176 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 DRAM1Q8N682 238 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 UBAC2Q8NBM4 344 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 MNS1Q8NEH6 495 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR4M1Q8NGD0 313 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 CENPNQ96H22 339 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 TBL1YQ9BQ87 522 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 RSG1Q9BU20 258 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 BBS2Q9BXC9 721 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 BEX2Q9BXY8 128 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 CHMP4BQ9H444 224 aaKnown RBP2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 STMN3Q9NZ72 180 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 CD300AQ9UGN4 299 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 NDRG2Q9UN36 371 aaKnown RBP2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 SIGLEC7Q9Y286 467 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 V9GYY9 64 aa2.25□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGKV6-21A0A0C4DH24 114 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGHV7-4-1A0A0J9YVY3 117 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 A0A1B0GW15 77 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 LINC01619G3V211 115 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 K7EN84 100 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 EIF1BO60739 113 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 VAPBO95292 243 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGLV2-8P01709 118 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms