RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 FCGR3AP08637 254 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 OR3A2P47893 321 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 LBX1P52954 281 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 PCK2Q16822 640 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 H1FNTQ75WM6 255 aaPredicted RBP18.49■□□□□ 0.55
CTCF-202ENST00000401394 POC1AQ8NBT0 407 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 FBXL17Q9UF56 701 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 A0A1W2PPH5 198 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 FAM221AA4D161 298 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 CFHR1Q03591 330 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 IAH1Q2TAA2 248 aaPredicted RBP18.49■□□□□ 0.55
CTCF-202ENST00000401394 NUP54Q7Z3B4 507 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 PTX4Q96A99 478 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 LIME1Q9H400 295 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 B3GAT1Q9P2W7 334 aa18.49■□□□□ 0.55
CTCF-202ENST00000401394 ATXN7O15265 892 aaPredicted RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 DIRAS3O95661 229 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 PDCD1Q15116 288 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 C14orf28Q4W4Y0 310 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 MISPQ8IVT2 679 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 DAZLQ92904 295 aaKnown RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 CHRDQ9H2X0 955 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 TMEM131Q92545 1883 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 TXNL1O43396 289 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 FAM76BQ5HYJ3 339 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 C5orf24Q7Z6I8 188 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 GKN2Q86XP6 184 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 PIGTQ969N2 578 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 HIST1H2BAQ96A08 127 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 MRPL24Q96A35 216 aaKnown RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 KIRREL1Q96J84 757 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 SMIM8Q96KF7 97 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 SERINC1Q9NRX5 453 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 CLEC1BQ9P126 229 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 DHRS7CA6NNS2 312 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 MSTNO14793 375 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 BLVRBP30043 206 aaPredicted RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 SFTPDP35247 375 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 TMEM33P57088 247 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 ZNF285Q96NJ3 590 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 RAB33BQ9H082 229 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 SH3BGRL3Q9H299 93 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 NIT2Q9NQR4 276 aa18.48■□□□□ 0.55
CTCF-202ENST00000401394 ZNF107Q9UII5 783 aaPredicted RBP18.48■□□□□ 0.55
CTCF-202ENST00000401394 FAM157AC9JC47 383 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 STMND1H3BQB6 276 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 SLC33A1O00400 549 aaPredicted RBP18.47■□□□□ 0.55
CTCF-202ENST00000401394 GIMD1P0DJR0 217 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 ZNF616Q08AN1 781 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 FAHD2BQ6P2I3 314 aaPredicted RBP18.47■□□□□ 0.55
CTCF-202ENST00000401394 CRIP3Q6Q6R5 217 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 DTWD2Q8NBA8 298 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 FAHD2AQ96GK7 314 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 CDC6Q99741 560 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 COPS7AQ9UBW8 275 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 MCTS1Q9ULC4 181 aaKnown RBP18.47■□□□□ 0.55
CTCF-202ENST00000401394 ZNHIT1O43257 154 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 APOC1P02654 83 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 HPNP05981 417 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 GABRR1P24046 479 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 APCDD1LQ8NCL9 501 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 OR1N1Q8NGS0 311 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 NKX2-4Q9H2Z4 354 aa18.47■□□□□ 0.55
CTCF-202ENST00000401394 ZNF878C9JN71 531 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 MPZP25189 248 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 FCGR2CP31995 323 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 OPRM1P35372 400 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 NAAAQ02083 359 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 KIAA0895LQ68EN5 471 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 DMBX1Q8NFW5 382 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 AQP10Q96PS8 301 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 CACFD1Q9UGQ2 172 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 MFNGO00587 321 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 BTNL8Q6UX41 500 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 C2orf50Q96LR7 162 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 RAB18Q9NP72 206 aa18.46■□□□□ 0.55
CTCF-202ENST00000401394 F5H5K5 113 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 H3BMH7 237 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 M0R036 132 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 NQO2P16083 231 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 FAHP16930 419 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 RPL12P30050 165 aaKnown RBP18.45■□□□□ 0.54
CTCF-202ENST00000401394 FABP9Q0Z7S8 132 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 MYBPHQ13203 477 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 AWAT1Q58HT5 328 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 FAM209BQ5JX69 171 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 FAM24BQ8N5W8 94 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 SRPK3Q9UPE1 567 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 ANGPTL7O43827 346 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 IGHMP01871 453 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 CD5P06127 495 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 MIDNQ504T8 468 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 ADAM5Q6NVV9 412 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 TOMM40LQ969M1 308 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 CHST11Q9NPF2 352 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 GSN-AS1Q9NRJ2 163 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 OSGIN2Q9Y236 505 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 A0A1W2PPE2 198 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 DBHP09172 617 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms