RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TBX1O43435 398 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 SYT7O43581 403 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 IGHV2-70P01814 119 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 MUC1P15941 1255 aaPredicted RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 PCMT1P22061 227 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 NR4A2P43354 598 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 NPY4RP50391 375 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 CAPZA1P52907 286 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 HCCSP53701 268 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 PAX5Q02548 391 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 SPHARQ15513 63 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 TP53I3Q53FA7 332 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 ZNF573Q86YE8 665 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 NKAIN3Q8N8D7 197 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 TIMD4Q96H15 378 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 COX4I2Q96KJ9 171 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 HES4Q9HCC6 221 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 DECR2Q9NUI1 292 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 UBAP1Q9NZ09 502 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 POLDIP2Q9Y2S7 368 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 NPTNQ9Y639 398 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 CR1P17927 2039 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 TNFRSF13BO14836 293 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 CD2P06729 351 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ACKR3P25106 362 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NANOS3P60323 173 aaKnown RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 PRDX4Q13162 271 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 Q499Y3 187 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 Q5PR19 223 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 HIST2H2BCQ6DN03 193 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 AHSA2Q719I0 299 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 SERPINA12Q8IW75 414 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 BPIFB6Q8NFQ5 453 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 OR51E1Q8TCB6 317 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 FAM168AQ92567 244 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 RHNO1Q9BSD3 238 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 OR51I2Q9H344 312 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 RELNP78509 3460 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 APCP25054 2843 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 SPTAN1Q13813 2472 aaKnown RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 MEGF11A6BM72 1044 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 POM121CA8CG34 1229 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 TMEM178BH3BS89 294 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 H3BUI4 141 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 J3QLW9 94 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 J3QT63 122 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 TPD52L2O43399 206 aaKnown RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 XPNPEP2O43895 674 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NCR1O76036 304 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 HEXAP06865 529 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ZNF19P17023 458 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ATF1P18846 271 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 GABRA5P31644 462 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ART1P52961 327 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 HLXQ14774 488 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 CLEC12BQ2HXU8 276 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 HFEQ30201 348 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NHLRC3Q5JS37 347 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 SYT6Q5T7P8 510 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 OR2T2Q6IF00 324 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 GDPGP1Q6ZNW5 385 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 LINC00596Q86U02 117 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 PXT1Q8NFP0 134 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 OR1M1Q8NGA1 313 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 OR5D14Q8NGL3 314 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 RAB1CQ92928 201 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 GCM1Q9NP62 436 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ACOT13Q9NPJ3 140 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NDUFB11Q9NX14 153 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ERVK-18Q9QC07 812 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 GHRLQ9UBU3 117 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 DUSP13Q9UII6 198 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 PKDREJQ9NTG1 2253 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 TRBV2A0A0J9YWF9 115 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 SRRM5B3KS81 715 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ZFPL1O95159 310 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 NRASP01111 189 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 PPIAL4GP0DN37 164 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 GATA3P23771 443 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 FGF9P31371 208 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 MDH2P40926 338 aaKnown RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 RPS11P62280 158 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP16-204ENST00000399976 ELP2Q6IA86 826 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 LRRC28Q86X40 367 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 SPICQ8N5J4 248 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 POC1AQ8NBT0 407 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 HPSE2Q8WWQ2 592 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 UFD1Q92890 307 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 FOXRED1Q96CU9 486 aaPredicted RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 CNBD2Q96M20 576 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 OR2V2Q96R30 315 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 BCL7BQ9BQE9 202 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 LIME1Q9H400 295 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ZCCHC4Q9H5U6 513 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 IFT22Q9H7X7 185 aa6.36□□□□□ -1.39
USP16-204ENST00000399976 ISG20L2Q9H9L3 353 aaKnown RBP6.36□□□□□ -1.39
USP16-204ENST00000399976 TMEM106BQ9NUM4 274 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms