RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SFRP5Q5T4F7 317 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 HAGHLQ6PII5 290 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 LHFPL2Q6ZUX7 228 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 TMEM251Q8N6I4 163 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 APOBEC3DQ96AK3 386 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 NPAS1Q99742 590 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 MARVELD1Q9BSK0 173 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 GHRLQ9UBU3 117 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 LRRK1Q38SD2 2015 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 LOC101059948A0A1B0GTJ6 334 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 CD1AP06126 327 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 GLI4P10075 376 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 MRPS34P82930 218 aaKnown RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 GSG1Q2KHT4 349 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF695Q8IW36 515 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 LRRC75AQ8NAA5 344 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 CCSO14618 274 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 GMDSO60547 372 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 CRYZL1O95825 349 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SLC6A1P30531 599 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SCAND1P57086 179 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 RBPJQ06330 500 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 TSPO2Q5TGU0 170 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 OR56B2PQ8NGI1 322 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 RRNAD1Q96FB5 475 aaKnown RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 TRAPPC2LQ9UL33 140 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 HEATR5AQ86XA9 2040 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 CLPSP04118 112 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 SERPINE2P07093 398 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 GSTP1P09211 210 aaKnown RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 C19orf57Q0VDD7 668 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 OR52B4Q8NGK2 314 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 RDH5Q92781 318 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 HS3ST1O14792 307 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 RFPL3SP0C7P2 107 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 NFYAP23511 347 aaPredicted RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 FABP6P51161 128 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 EFNB2P52799 333 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 RBM39Q14498 530 aaKnown RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 PDCD1Q15116 288 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 ADPRHL1Q8NDY3 354 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 PPP1R35Q8TAP8 253 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 POC1BQ8TC44 478 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 RGCCQ9H4X1 137 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 UFSP2Q9NUQ7 469 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 PRRG2O14669 202 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 ICMTO60725 284 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 ALX3O95076 343 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 GZMKP49863 264 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 GAS1P54826 345 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 ARHGAP5-AS1Q96IT6 56 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 PCDHGA9Q9Y5G4 932 aaKnown RBP12.38□□□□□ -0.43
SCAF4-202ENST00000399804 FLVCR1Q9Y5Y0 555 aa12.38□□□□□ -0.43
SCAF4-202ENST00000399804 WNT11O96014 354 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 PRKACAP17612 351 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 ZDHHC23Q8IYP9 409 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 TMEM38BQ9NVV0 291 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF732B4DXR9 585 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 LYZL6O75951 148 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 ZNF728P0DKX0 622 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 DUSP1P28562 367 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 IL2RGP31785 369 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 GABRA2P47869 451 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 FUT6P51993 359 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 SLC25A47Q6Q0C1 308 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 MARCH1Q8TCQ1 289 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 MAP6Q96JE9 813 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 LOC102723996A0A087X1L8 192 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 TRBV5-5A0A0J9YX44 114 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 A0A1B0GUH1 482 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 PHLDA2Q53GA4 152 aa12.37□□□□□ -0.43
SCAF4-202ENST00000399804 ZC3HAV1LQ96H79 300 aaKnown RBP12.37□□□□□ -0.43
SCAF4-202ENST00000399804 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 NPIPB7O75200 414 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 CD82P27701 267 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 CEBPGP53567 150 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 BAMBIQ13145 260 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 C17orf107Q6ZR85 190 aa12.36□□□□□ -0.43
SCAF4-202ENST00000399804 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms