RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 GLB1P16278 677 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 NUDT1P36639 197 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 EIF1P41567 113 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 HOXA1P49639 335 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 NOVA1P51513 510 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 KCNJ8Q15842 424 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZIC1Q15915 447 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ODF4Q2M2E3 257 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 STUMQ69YW2 141 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 DNM1P34Q6PK57 102 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 UNQ6126/PRO20091Q6UXV3 157 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF836Q6ZNA1 936 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 GJC3Q8NFK1 279 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR9A4Q8NGU2 314 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR2Y1Q8NGV0 311 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 PIGXQ8TBF5 258 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 BAALCQ8WXS3 180 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RPEQ96AT9 228 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM80Q96HE8 168 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 DIRAS2Q96HU8 199 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TSSK2Q96PF2 358 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 PLSCR3Q9NRY6 295 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF780BQ9Y6R6 833 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 NKX2-1P43699 371 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 CRYBA4P53673 196 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 CDH11P55287 796 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 UBE2MP61081 183 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FABP5Q01469 135 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 HHEXQ03014 270 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 KRR1Q13601 381 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 PYDC2Q56P42 97 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF776Q68DI1 518 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 VASNQ6EMK4 673 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ARL9Q6T311 187 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM98AQ8NCA5 519 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 PXT1Q8NFP0 134 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 KBTBD8Q8NFY9 601 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ISOC2Q96AB3 205 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZC3HAV1LQ96H79 300 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 JSRP1Q96MG2 331 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR2M4Q96R27 311 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 DPCDQ9BVM2 203 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAIM2Q9BWQ8 316 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TEX101Q9BY14 249 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM60AQ9NP50 221 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 A4GALTQ9NPC4 353 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 KCNE5Q9UJ90 142 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 KLHL21Q9UJP4 597 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FBXO4Q9UKT5 387 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 KLHDC2Q9Y2U9 406 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 NUBP2Q9Y5Y2 271 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 SIRT4Q9Y6E7 314 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 U3KQE9 123 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TP53BP1Q12888 1972 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 CDC14CA4D256 554 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 LRP5LA4QPB2 252 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 M0QZK8 103 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 CHEK1O14757 476 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 CASKO14936 926 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 HPGDSO60760 199 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC2A2P11168 524 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 MYL12AP19105 171 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 GABRA3P34903 492 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 NBL1P41271 181 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 PRKXP51817 358 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR10A3P58181 314 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 SNRPEP62304 92 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM3AP98173 230 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM53BQ14153 422 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 SHISA6Q6ZSJ9 500 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM99Q8N816 258 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 MORN4Q8NDC4 146 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ATP6V1C2Q8NEY4 427 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 RASSF5Q8WWW0 418 aa5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 HINT3Q9NQE9 182 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TXNL4BQ9NX01 149 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF106Q9H2Y7 1883 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-202ENST00000399438 TEX13DA0A0J9YY54 714 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM157AC9JC47 383 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 H0YGG7 62 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 K7EN84 100 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 M0R036 132 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAAHO00519 579 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 TNFSF11O14788 317 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF749O43361 778 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MBTPS2O43462 519 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 FARS2O95363 451 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MED26O95402 600 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM50AO95807 157 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 IFI30P13284 250 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 UGT2B7P16662 529 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MAKP20794 623 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 PSMA1P25786 263 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 EFNB2P52799 333 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MAZP56270 477 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 CTBP2P56545 445 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms